Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1028 |
Symbol | |
ID | 5693863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1212746 |
End bp | 1214875 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641263625 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001528915 |
Protein GI | 158521045 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4581] Superfamily II RNA helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGACA GCACACCCCC ACGGAAGAAA CGCGCAAGGC CGCGGCGAAA AGAGCGCCCC CCTGTCACCC CGAGCCTTCG AAAAAAAACC GCGGCAAAAA GCAAAAAACC CCGGCGCCCC GCCCTCAAGC CGGGCAGCGA TCCCCGGCTG AAAAAGGTAT TTGCCGCCAT CGGCGTGCCT GAACAGGCCC CCTTTTCCCC GGACCCGTTT CAACTGGAGG CCCTGAAAGC GGTGCGGACA TCGGACTGCA TCGTCACAGC GCCCACCGGC GCTGGAAAAA CGTGGATTGC CGAGCAGGTG ATTGCCGCCA TGCGGAAAGA GGGCAAAAAG ACATGGTACG CCTCACCGCT CAAGGCCCTG AGCAACTCCA TCTACGAACT CTTTTCCGGC ATGTTCGGAC CGGAAAATAC CGGCATCCTT ACCGGGGACC GAAAAGAAAA TCCCAATGCC CCCATCATCG TCGGCACCAC CGAAATCCTG CGCAACCAGC TTTACGACTC CATGTACAGC GGCGACGACC TGGACACCGA CTTTGTCATT CTGGACGAGG CCCATTTCCT GGGAGACGAG GATCGGGGCG TGGTGTGGGA AGAGACCATG ATCTACCTGC CCCGGCGCAT TCCCATCCTG ATGCTGTCCG CCACCATCGG CAACCCGGAC CAGATTGCCG CATGGCTTTC CACCATAAGA CAAAGGCCCT GCCGGGTGGT AAAAGAGACC AACCGGCCGG TGCAGCTTTA CCCTCTCTTT CTGCATCCTT CCGGCACGCT CTTTCCCCTG CTGCGCGAAT CCTCCGGGAC CGGCCCCCGG GGCCTGTACA AGCGAATGAA TGATTTTATC AAGGCCCGGG TCCAGCTGGC GCCGGCCCAC CGGCTGCCGC CCGTAAACGA AATTTTAAAT GTGCTGCGCA AGTACAACCT GCTGCCCGCC ATCTTCTTCA TGAAGTCCAG GGCCGACTGC GACAAGGCCC TTGATCTGTG CGACGACCAG AACAGGGCCG TTGATCCGGA GCGGTGGCGC TGGCTGGAGG AGCGCATCGA CCGAATGGTG GCCGCCACCC CTTACCTGGC AGGCCACAAA CAGCTTTTGC TGATCCGGGA CCGGGCCGTG GCGGCCCATC ACAGCGGTCA CCTGCCCGTA TGGAAAAAAG CGGTGGAAAC CTTCATGAAC GAAGGGCTTC TGGACGCGGT GTTTGCCACC TCCACGGTGG CGGCCGGGGT CAACTTTCCG GCCCGCAGCG TGGTGATTCT CAATTCCGAC CGGTTCAACG GCAAGGATTT TCTGCCCCTT TCTTCCATCG AGTTTCACCA GATGACCGGC CGGGCCGGCC GCCGGGGCAA GGACAACATC GGTTTTGCCG TAATGGTGCC GGGCAAGTTC ATGGACTTAA AACACGTGGC CCAGGTGGCC GATGCCCCGG CGTCGGATAT CTACAGCCAG ATCAAGATTA ATTTTTCCAT GGTGCTCAAC CTGCTCCTGA GCCACACCCC GGACCAGGTC AAGACATTGC TGAACCAGTC CTTTGCCCTG TTTCAACGCA CCCAGAGGGG CATGGCCGCC GATAACGTTC TCTGGGACGA TTTTATCCGT CACCTGGACT TTCTCAAGGA TACCGGGTTT GCCGATGAAG CGGGCCGCCT CACCGACGAC GGCATATGGG CCTCCAACCT GCGGGTGGAC CACCCCCTGA TGATTGCCGA AGGATTCCGG CTCTCGTTGT TCCCGGAAGA CGACCCGGCC CTGCTGGCAG CGGTGGTGGC CGCCTTTGTC AACGAACGCC AGGTGGTGGA CAGCCCGGCC GTGGAGCACG CCGCGCCCAA GTCCCTGCGC CGGGTGTTCA ACAGCCTGAA ACACGCCATG ACGCCCTTTA CCCGGCACAT GAAAAAAAGA GGATTTGAAC CCACTGATCT CTTCCTGGCG CCGGCGGTAA CCATGCACCA GTGGGCCACG GACATGGACT GGGAGGATGT GGTGTTCCGG ACCGGCAGTG AGGAGGGGGA TCTGGCCAAC CTTGTTTTCC GGGCCGCGGA CAACCTTCGC CACATCGCCA CCCTGACCGA CATCTTTCCC CGGGCCGCGC AGAGCGCCAG GGAGGGCGTT GATCTGATTG TTCGGGAGCC GCTGGTATAA
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Protein sequence | MTDSTPPRKK RARPRRKERP PVTPSLRKKT AAKSKKPRRP ALKPGSDPRL KKVFAAIGVP EQAPFSPDPF QLEALKAVRT SDCIVTAPTG AGKTWIAEQV IAAMRKEGKK TWYASPLKAL SNSIYELFSG MFGPENTGIL TGDRKENPNA PIIVGTTEIL RNQLYDSMYS GDDLDTDFVI LDEAHFLGDE DRGVVWEETM IYLPRRIPIL MLSATIGNPD QIAAWLSTIR QRPCRVVKET NRPVQLYPLF LHPSGTLFPL LRESSGTGPR GLYKRMNDFI KARVQLAPAH RLPPVNEILN VLRKYNLLPA IFFMKSRADC DKALDLCDDQ NRAVDPERWR WLEERIDRMV AATPYLAGHK QLLLIRDRAV AAHHSGHLPV WKKAVETFMN EGLLDAVFAT STVAAGVNFP ARSVVILNSD RFNGKDFLPL SSIEFHQMTG RAGRRGKDNI GFAVMVPGKF MDLKHVAQVA DAPASDIYSQ IKINFSMVLN LLLSHTPDQV KTLLNQSFAL FQRTQRGMAA DNVLWDDFIR HLDFLKDTGF ADEAGRLTDD GIWASNLRVD HPLMIAEGFR LSLFPEDDPA LLAAVVAAFV NERQVVDSPA VEHAAPKSLR RVFNSLKHAM TPFTRHMKKR GFEPTDLFLA PAVTMHQWAT DMDWEDVVFR TGSEEGDLAN LVFRAADNLR HIATLTDIFP RAAQSAREGV DLIVREPLV
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