Gene Dole_0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0964 
Symbol 
ID5693799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1125894 
End bp1126829 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID641263561 
Productputative radical SAM protein 
Protein accessionYP_001528851 
Protein GI158520981 
COG category[R] General function prediction only 
COG ID[COG1242] Predicted Fe-S oxidoreductase 
TIGRFAM ID[TIGR01212] radical SAM protein, TIGR01212 family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCGG AGAGACGATA TTACGATCTG AACCGCTATT TCCGGTCGGT TTTTGGATGC 
CGGGTGCACA AGATCACCCT TGATGCCGGG TTTTCCTGCC CCAACCGGGA CGGTACCCTT
TCCTCCGGGG GGTGCATTTA CTGTAATGCG CGGGGCTCGG GAACCGGGGC CCACGCCAGA
GGGCTGTCGG TGACCGATCA GCTGCTGGCC GGCCGGCAGG TTATGACCCG CCGGTTTAAG
GCTAAAAAAT TCATCGCCTA TTTTCAGGCG TATACCAATA CTTACGCGCC GGTGGACCGG
CTGAAGGCCC TGTACGACGA GGCCCTGGCC GTGCCTGACA TGGTCGGCAT TGCCGTGGGC
ACCCGGCCGG ACTGCGTGGA CGACGCGGTG CTGGACCTGC TGGCATCCTA TGCGAAACAG
CACATGGTGT GGCTGGAGAT CGGGGTGCAG AGCGCTTTGG ACCGGACCCT GGCCATTATC
AACCGGGGAC ACGACACCGC CTGCACCACT TCCGCTGTTC AGGCAGCTGT GGACCGGGGG
CTGCTGGTCT GCGGCCATAT CATTCTGGGG CTGCCCGGTG AAAGCCGGGA AGAGATGGTG
GAAACAGGCC GGTATATCGC GGATTTGGGC ATGGCCGGAG TAAAGTTTCA CGTGCTGTAC
GTGGTCCGGG GAACACCCCT GGCGGCCATG TCGGGCAACG GGGACTACCG GTGCATGGAG
CAGCAGGATT ACGTGGACGC GGTGTGCGAC GTGCTGGAGG TGCTGCCGCC GACTATGGTG
ATTCAGCGGC TCACCGGAGA CCCCCATCCG GATGAGCTGG TGGCGCCTTT GTGGACCCTG
GACAAGCGGG GAACGCTAGA GGCTATCAAC GATACACTGG AGCGCCGCGA TTCGTGGCAG
GGAAAGCATT ACAAAACCCT GCCAGGCCCG GGGTGA
 
Protein sequence
MMPERRYYDL NRYFRSVFGC RVHKITLDAG FSCPNRDGTL SSGGCIYCNA RGSGTGAHAR 
GLSVTDQLLA GRQVMTRRFK AKKFIAYFQA YTNTYAPVDR LKALYDEALA VPDMVGIAVG
TRPDCVDDAV LDLLASYAKQ HMVWLEIGVQ SALDRTLAII NRGHDTACTT SAVQAAVDRG
LLVCGHIILG LPGESREEMV ETGRYIADLG MAGVKFHVLY VVRGTPLAAM SGNGDYRCME
QQDYVDAVCD VLEVLPPTMV IQRLTGDPHP DELVAPLWTL DKRGTLEAIN DTLERRDSWQ
GKHYKTLPGP G