Gene Dole_0929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0929 
Symbol 
ID5693764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1083873 
End bp1085498 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content59% 
IMG OID641263526 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001528816 
Protein GI158520946 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000115197 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTATC CGGACAGAAA CAATCCCTAT ACATTTAATC CCTACCTGGA GTGGCGGAAA 
AAGGTTGATT ATTACCAGGC AGACCCCTTC GTCCAGAAGA TGATCAGGGT GTTTGCCGGG
GACGAGGCGG AAAAGGTGGA TGCCGAGGCC GCAGCCTTTT CCAAAAAGGT CTCCTTTCGC
TGGCGGGACC TGGCCGAGAG AATCGCCACG CCGGACAACC GACCCTACAT GATGCACTAT
GACGGCCACA AGAACCGCAT CGACCGCATT GTCCGGCCCT ATGAAATCGA GGTCATGGAA
AAAGAGGTGT TTGCCGAGGC GTGGTTTTCC CCCAAAACCT CCCTCTGGAC CCGGTTTATC
AAGCTTTACC TGCTCAGCCA GAACTCCGAA GCCGGCCTGG TCTGCCCGTT GATCTGCACC
TGGGGAATGG CGGACCTGCT GGAAAAATAC GCGGACACGC CCGAGACCCG GCATATTCTT
GAGCACACCC GGGACGGCAT CAACGGCGAA TTTGCCATCG GTGCCCAGTT TGTCTCCGAA
ATCCAGGGCG GGTCCGACGT GCCGGCCAAC CTGCTGGAGG CGGTCGAAGA AGACGGCCGG
TGGCGGCTTT ACGGCACCAA GTTCTTCTGC TCCGCGGCCC ATGCCGACTA TTCGGTGGTC
ACGGCCAAGC CCAAAGGCTC GGAAGAAGTG GCCCTGTTTG TTATTCCCAT GTGGCTTGAC
GGCAACAGGG AAAAGGAGAT TCGCAACGGC TTCACCATTG ACCGCCTCAA GTGGAAAATG
GGCACGGTGG AGCTGCCCAC GGCCGAGATC ACTTTTAACG GAGCCGCGGC CTATCCGGTG
GGGCCGCTGA ACCGGGGCGT GGCCAATGTG GTGGGCATTG TGCTGACCTG CTCCCGCCTG
GCCCTTTCCA TTGGATCGGC CGGCGGCATG GCCCGGGGCC TGCGGGAAGT GGAAAAGTAC
GGCGAGTTCC GGACCGCTTT TGGTATCGCC TTAAAGGATT TTCCCATGAT GGCGGCCCAG
TACCTCACGA ACGCCGGCTG TGTCCGGCGC ACCATTGCCG GCAACTTCAA GGTGTATAAA
GCCTTTATCG AGCTTCCCGG CGGCCTTTCC GTGGGCCTGG ACGGAGGGGG CCTGTCGGTC
AGTTCAAAGG CGGATGAACC GCCGGAGCTT CGAAAACACC GCTTTGACGT CCGGCAATTG
ATCCTTTTGC AGAAAATCAC CGTGGCCAGG GATGCCATCG ATCTTTCCCG ACTGGGCATC
AGCGCCTTTG GCGGCCACGG CGTGATGGAG GATTTTTCCA GCTTTCCCCG CATGTTCCGT
GACGGCATGG TCAACGAACT GTGGGAGGGG CCGCGCAACG TGCTTTTGAC CCAGCTCTTT
ATGGACTTTC AGAAGGTCCG TAACTGGTAT CCGCCGAACG AGTTTGCGGG CCGAATCCTG
CAAGGGGCGG ATGAAACCCT GGTCCGGGGC TTTGCAAAGG AGCTGGAAGA GATCCTGGAA
ACGCCCCACC TGTTTGACAT GGATGAAAAG ACCATTGCCG TTTGCGGCCA GTGGGACGAC
TTCTGCGAGC GGTTCTTTCA CGCCTACCAG GATCTGGCGC TGGCAGAGGT GGAAGCTGCC
GGATAA
 
Protein sequence
MSYPDRNNPY TFNPYLEWRK KVDYYQADPF VQKMIRVFAG DEAEKVDAEA AAFSKKVSFR 
WRDLAERIAT PDNRPYMMHY DGHKNRIDRI VRPYEIEVME KEVFAEAWFS PKTSLWTRFI
KLYLLSQNSE AGLVCPLICT WGMADLLEKY ADTPETRHIL EHTRDGINGE FAIGAQFVSE
IQGGSDVPAN LLEAVEEDGR WRLYGTKFFC SAAHADYSVV TAKPKGSEEV ALFVIPMWLD
GNREKEIRNG FTIDRLKWKM GTVELPTAEI TFNGAAAYPV GPLNRGVANV VGIVLTCSRL
ALSIGSAGGM ARGLREVEKY GEFRTAFGIA LKDFPMMAAQ YLTNAGCVRR TIAGNFKVYK
AFIELPGGLS VGLDGGGLSV SSKADEPPEL RKHRFDVRQL ILLQKITVAR DAIDLSRLGI
SAFGGHGVME DFSSFPRMFR DGMVNELWEG PRNVLLTQLF MDFQKVRNWY PPNEFAGRIL
QGADETLVRG FAKELEEILE TPHLFDMDEK TIAVCGQWDD FCERFFHAYQ DLALAEVEAA
G