Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0928 |
Symbol | |
ID | 5693763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1082281 |
End bp | 1083666 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641263525 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001528815 |
Protein GI | 158520945 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000384359 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGACCA GAAAAAAACC TGCAAAAAAA CCCGCAAAAC CGGCCTCCCC AAAAGGACCC GGCCCCAAGG GAATTGCCAC CCGCCTGCGG GTGCTTAAGG CGGCACGACA GGTCTTTACC ACCGCCTCCT TTCAGGCGGC CGGCATTCGG GCCATTGCCG AAAAGGCGGG CGTGCCCCAT CCCCTGGTGA TCCATTATTT TAAATCAAAG GAGGCCCTGT TCGAAGAGGT GGCCATGGAG ATCCAGAACG AAATCCTGGA GGGCCACCCT GAATTTTTCA GTCGGCTTCA GACCATGGGG GCCGACAAGC GCAAGGCCGT TTACCTGGAA GGCATTCTGC GCCAGGGGCT GCGCCGGCCC GATGCCTACC GGGTGATGCT GCTAAACGCC GTGGAAATGG TCGACCCGGA CACACCGCTT CCGGGCGTGG ACCGCATGGC CCGGGTGCAT GAAAAGGTTT TGTCCCTGGT GGCCGATCAT ATTCTGGAGC AGGCACCGGC ACAGGAGACC GCCATGTTCA TGCTTGTGTT CATGCTGGTG GCCGTCCATT TTATCGGGGG CCGGGCCTTT CATCAAAAGA CCCTTGGCGT AGATGACAAA GATTATGAAA ACTGGGTGAA AAACACCCTG GCCGGGCTTT TTATCCCGGT GCTGGACGTG CTGTCCAAAG GCAAGGCCGC GGTGCCGGCC GAGTATATGG CCCGGTGGCC GGGAACGCCT GTTCACCCGC CGGAGCGCTC CGCTTCAGCG GCCAAAAAAC AGCAGGAAGC GCCCCTGCCC AGAGGCGAGA TCACGAAAAA AAGAATCCTG TACGCGGCCC GCCGGGTCTT TACCACCCGG CCTTACGACA GCGCCACCAT CCGGCAGATC GGCCAGGCAG GCAAATTCGA TTTTTCCCGC ATTCACCACT TTTTCCCCAC CAAGGCCGCG CTCTTTGAAG CCGTGATCCA GGACGCCTTT GAAACGTTTG TCGAGACCAT TGAAAGCTGG CAGCAGGGCG TAAAAGGGCT GCCGCCGGAA GAGGTGTTCA TCCACTACCT TCAACAGGGC CTTGCCTACT GTTTTGAAAA CCGGGAAATG GTGGGCACCC TGGTCATCAA CATCGCCCAC TACGACAGCC ACCGGCATGT GTCCGGGTTT ACCCTGATGA CCCGGGTCCA CTCCAACCTG CTGAAGATGG TGGAGCAGAG CGTGCCGCCC GGCATTCCCG CCGAAGAAGT GAGCAGATGG CTTTATACCA TCGTCATGAT GGGCTACACC CTTGCCGGAG CCCCTGCCTA CCCGGCCCGG ATCATGGGCC TTGACCCGGA CTCCGGCGCC TACAAAAAAA AGGTCTTTGA GATCCTCTGC TTTGTCTTTC TGCCCTCCCT GAGAAGCCGC CTGTAA
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Protein sequence | MPTRKKPAKK PAKPASPKGP GPKGIATRLR VLKAARQVFT TASFQAAGIR AIAEKAGVPH PLVIHYFKSK EALFEEVAME IQNEILEGHP EFFSRLQTMG ADKRKAVYLE GILRQGLRRP DAYRVMLLNA VEMVDPDTPL PGVDRMARVH EKVLSLVADH ILEQAPAQET AMFMLVFMLV AVHFIGGRAF HQKTLGVDDK DYENWVKNTL AGLFIPVLDV LSKGKAAVPA EYMARWPGTP VHPPERSASA AKKQQEAPLP RGEITKKRIL YAARRVFTTR PYDSATIRQI GQAGKFDFSR IHHFFPTKAA LFEAVIQDAF ETFVETIESW QQGVKGLPPE EVFIHYLQQG LAYCFENREM VGTLVINIAH YDSHRHVSGF TLMTRVHSNL LKMVEQSVPP GIPAEEVSRW LYTIVMMGYT LAGAPAYPAR IMGLDPDSGA YKKKVFEILC FVFLPSLRSR L
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