Gene Dole_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0928 
Symbol 
ID5693763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1082281 
End bp1083666 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content59% 
IMG OID641263525 
ProductTetR family transcriptional regulator 
Protein accessionYP_001528815 
Protein GI158520945 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000384359 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGACCA GAAAAAAACC TGCAAAAAAA CCCGCAAAAC CGGCCTCCCC AAAAGGACCC 
GGCCCCAAGG GAATTGCCAC CCGCCTGCGG GTGCTTAAGG CGGCACGACA GGTCTTTACC
ACCGCCTCCT TTCAGGCGGC CGGCATTCGG GCCATTGCCG AAAAGGCGGG CGTGCCCCAT
CCCCTGGTGA TCCATTATTT TAAATCAAAG GAGGCCCTGT TCGAAGAGGT GGCCATGGAG
ATCCAGAACG AAATCCTGGA GGGCCACCCT GAATTTTTCA GTCGGCTTCA GACCATGGGG
GCCGACAAGC GCAAGGCCGT TTACCTGGAA GGCATTCTGC GCCAGGGGCT GCGCCGGCCC
GATGCCTACC GGGTGATGCT GCTAAACGCC GTGGAAATGG TCGACCCGGA CACACCGCTT
CCGGGCGTGG ACCGCATGGC CCGGGTGCAT GAAAAGGTTT TGTCCCTGGT GGCCGATCAT
ATTCTGGAGC AGGCACCGGC ACAGGAGACC GCCATGTTCA TGCTTGTGTT CATGCTGGTG
GCCGTCCATT TTATCGGGGG CCGGGCCTTT CATCAAAAGA CCCTTGGCGT AGATGACAAA
GATTATGAAA ACTGGGTGAA AAACACCCTG GCCGGGCTTT TTATCCCGGT GCTGGACGTG
CTGTCCAAAG GCAAGGCCGC GGTGCCGGCC GAGTATATGG CCCGGTGGCC GGGAACGCCT
GTTCACCCGC CGGAGCGCTC CGCTTCAGCG GCCAAAAAAC AGCAGGAAGC GCCCCTGCCC
AGAGGCGAGA TCACGAAAAA AAGAATCCTG TACGCGGCCC GCCGGGTCTT TACCACCCGG
CCTTACGACA GCGCCACCAT CCGGCAGATC GGCCAGGCAG GCAAATTCGA TTTTTCCCGC
ATTCACCACT TTTTCCCCAC CAAGGCCGCG CTCTTTGAAG CCGTGATCCA GGACGCCTTT
GAAACGTTTG TCGAGACCAT TGAAAGCTGG CAGCAGGGCG TAAAAGGGCT GCCGCCGGAA
GAGGTGTTCA TCCACTACCT TCAACAGGGC CTTGCCTACT GTTTTGAAAA CCGGGAAATG
GTGGGCACCC TGGTCATCAA CATCGCCCAC TACGACAGCC ACCGGCATGT GTCCGGGTTT
ACCCTGATGA CCCGGGTCCA CTCCAACCTG CTGAAGATGG TGGAGCAGAG CGTGCCGCCC
GGCATTCCCG CCGAAGAAGT GAGCAGATGG CTTTATACCA TCGTCATGAT GGGCTACACC
CTTGCCGGAG CCCCTGCCTA CCCGGCCCGG ATCATGGGCC TTGACCCGGA CTCCGGCGCC
TACAAAAAAA AGGTCTTTGA GATCCTCTGC TTTGTCTTTC TGCCCTCCCT GAGAAGCCGC
CTGTAA
 
Protein sequence
MPTRKKPAKK PAKPASPKGP GPKGIATRLR VLKAARQVFT TASFQAAGIR AIAEKAGVPH 
PLVIHYFKSK EALFEEVAME IQNEILEGHP EFFSRLQTMG ADKRKAVYLE GILRQGLRRP
DAYRVMLLNA VEMVDPDTPL PGVDRMARVH EKVLSLVADH ILEQAPAQET AMFMLVFMLV
AVHFIGGRAF HQKTLGVDDK DYENWVKNTL AGLFIPVLDV LSKGKAAVPA EYMARWPGTP
VHPPERSASA AKKQQEAPLP RGEITKKRIL YAARRVFTTR PYDSATIRQI GQAGKFDFSR
IHHFFPTKAA LFEAVIQDAF ETFVETIESW QQGVKGLPPE EVFIHYLQQG LAYCFENREM
VGTLVINIAH YDSHRHVSGF TLMTRVHSNL LKMVEQSVPP GIPAEEVSRW LYTIVMMGYT
LAGAPAYPAR IMGLDPDSGA YKKKVFEILC FVFLPSLRSR L