| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0886 |
|---|
| Symbol | |
|---|
| ID | 5693721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1037266 |
|---|
| End bp | 1037889 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641263483 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001528773 |
|---|
| Protein GI | 158520903 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA AAAAAGTTCT GGTCATTGAT GACGAGCAGA TTGTTTTAGA CAGCGTACGG
AAGATACTGG CCGACCGGTA CGAAGTGGAG ACGGCCGACA ACGGAACCCG GGGGATCAAG
CTGGCCCTCA AGAACCCCTG CGATATCGTG CTGACCGACA TTCGCATGCC CGACGTGGGG
GGGCTGATCG TGCTGCGGGA GATCAAGCGG CAGAAGCCGT CGCTGCCGGT GATGATCATC
ACCGGGTATG CCAGCGTCCG TTCCGCGGTG GCGGCCATGA AGCTGGGGGC CGCGGACTAT
ATTGAAAAGC CGTTCACCCC GGAGCAGCTG GCCGAGGCCG TGGCTACCGC CATTGAGCGC
GAGAAAGAAA GAGAGCCGGA TGCCCAGCAG GTCATTCACA AAGAGGAGAT GCTCCGGGTG
CTGGAGCGGG CCGGCCATGA CAACGATTTT CGAAGCGCCC TGCTCAACCA CGGGGCCGAT
GCCCTTGAGA ACTACGAGTT GACAAAACCC GAGATGCTGG CCGTCATCAC CGGCGATATT
CACTGGATAG AAGAACAGAT CGGCCCCCTG ACCGACAACC AGAAAAAATG GCTGGAGGCC
CGGCTGGCAG CGGAAATCTG GTAA
|
|---|
| Protein sequence | MEKKKVLVID DEQIVLDSVR KILADRYEVE TADNGTRGIK LALKNPCDIV LTDIRMPDVG
GLIVLREIKR QKPSLPVMII TGYASVRSAV AAMKLGAADY IEKPFTPEQL AEAVATAIER
EKEREPDAQQ VIHKEEMLRV LERAGHDNDF RSALLNHGAD ALENYELTKP EMLAVITGDI
HWIEEQIGPL TDNQKKWLEA RLAAEIW
|
|---|
| |