| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0868 |
|---|
| Symbol | |
|---|
| ID | 5693703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1017713 |
|---|
| End bp | 1019140 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641263465 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001528755 |
|---|
| Protein GI | 158520885 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACACA TACTGATCGT TGATGATGAG CCGATGGTGG CCATGCTGCT GTCTGAGACC
GTGTCCCAGG AGGGGTGGCT TCCGGTGTGC GTACATACTC TGGCCGACGC ACGGGAAATC
ATCGGCGCCC AGTCCTTTGA CGTGGTGTTG CTGGATATTC AGCTGCCTGA CGGCAGCGGC
TTGGACGCGC TCTCCTTTTT TGTCGGCGTG ACAGCCGCCC CCGAGGTGCT CATCATGACC
GGCTACGGCC ACCCGGATGC AGCCGGACTG GCCCTGGAGC ACGGGGCATG GGACTATGTG
GAAAAGCCGA TCAACATCAA AAAGATCATT CTTTCCATTC GCCGGGCCCT GGAGTTCCGC
CAGGCCAAGA TGGCCGGTAA AAAGCGTCAT ATTCTCAAGC GAAACGGAAT CGTGGGGGCC
AGCCAGGCCA TTGGCGAGTG CCTGGAACAG ATGGCCGAGG CGGCGGACGG GGACCACAGC
GTCCTTTTGT CCGGTGAAAC CGGCACCGGC AAGGAGCTGT TTGCCAGGGC TATCCATCTG
AACAGCCAGC GGGCGGAATC CAATTTTGTG GTGGTGGACT GCACGGCCTT AAGCGAGACC
CTGATCGAGA GCAGCCTTTT TGGTCATGTG AAGGGCGCTT TTACCGATGC GGGCCGGGAC
CGGGACGGGC TGATCAAGCT GGCCCACCGG GGCACCCTGT TTCTGGACGA GATCGGCGAG
CTGCCCCTGG AAATACAGAA AAAATTTCTG CGGGTGCTGG AGGAAAAAAA GTTTCGGCCC
GTGGGCAGCA CCACGGAGGT GAAAAGCGAT TTCCGCCTGA TTTCCGCCAC CAACCGGAAC
CTGGACGAAA TGGTAACAAG CGGCGATTTC CGCAACGACC TGCTCTACCG TGTAAAGGCA
CAGAAGATCG TGCTGCCACC GCTGCGCAAC CGGCGAGAGG ACATTCCCGA GCTGGTCTCT
CATTATCTCT CCCGAATATG CCGGCGTATG GACATTGAGC CCAAGACGGT GCATCCGGAA
TTTCTGCAGT GCCTTTGTGA CTATGAGTGG CCCGGTAACG TCCGGGAACT GGTGAATGTC
CTTGACCAGG TGGTCTGTTC GACCCGCGCC ATCCCGGCTT TGTTCCATAA ACACCTCCCT
CTGGAGATTC GTTCCGCGGT TATTCGTCGG CAGGCGGGGG TGGCCGGCGC ATCGGCACCA
TCGTCATCGG AACCGGGTGC TGAACTTTTT ACGGCTCTGA AGGACCAGAA GATGCTCACC
TGGCAGGATT TCAGAAAGCA GGTGCTGGAA ACGGTTGAAA AGACCTATTT TGAAAGGCTT
CTGGCCACCA CCGACGGCGA CATCGGCCAA ATGGTCAAGA TCGCCGACAT GAGCAAGTCC
CGAATTTACG GCCTGATCAG CAAACACGAT CTGACCGTGA AAAAATAA
|
|---|
| Protein sequence | MPHILIVDDE PMVAMLLSET VSQEGWLPVC VHTLADAREI IGAQSFDVVL LDIQLPDGSG
LDALSFFVGV TAAPEVLIMT GYGHPDAAGL ALEHGAWDYV EKPINIKKII LSIRRALEFR
QAKMAGKKRH ILKRNGIVGA SQAIGECLEQ MAEAADGDHS VLLSGETGTG KELFARAIHL
NSQRAESNFV VVDCTALSET LIESSLFGHV KGAFTDAGRD RDGLIKLAHR GTLFLDEIGE
LPLEIQKKFL RVLEEKKFRP VGSTTEVKSD FRLISATNRN LDEMVTSGDF RNDLLYRVKA
QKIVLPPLRN RREDIPELVS HYLSRICRRM DIEPKTVHPE FLQCLCDYEW PGNVRELVNV
LDQVVCSTRA IPALFHKHLP LEIRSAVIRR QAGVAGASAP SSSEPGAELF TALKDQKMLT
WQDFRKQVLE TVEKTYFERL LATTDGDIGQ MVKIADMSKS RIYGLISKHD LTVKK
|
|---|
| |