| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0850 |
|---|
| Symbol | |
|---|
| ID | 5693685 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 995030 |
|---|
| End bp | 995338 |
|---|
| Gene Length | 309 bp |
|---|
| Protein Length | 102 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641263447 |
|---|
| Product | glycoside hydrolase family protein |
|---|
| Protein accession | YP_001528737 |
|---|
| Protein GI | 158520867 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000054884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGA AAAAGCAGTA CCTCAAAGGT AAAAAAATGT GCAAGGTGAC CTTTCGGGTG
CCTGGAAAGG CATCCATGGG GGCAAAAACC GTCAACCTCG CCGGGGATTT TAACCACTGG
AGCGTGACCG ACTCCCCCAT GAAGAAACTG AAAAACGGGG ACTTCACATT GACGCTCAAC
CTGAAGACCG GCAAAGAGTA CCAGTTTCGT TACCTGATGG ACGAAAAAGT ATGGGAAAAT
GACTGGGAAG CTGATAAATA TGTGCGTAGT GAATACGGAA ACTGTGAAAA TTCCGTGGTT
GTTGTGTAA
|
|---|
| Protein sequence | MSMKKQYLKG KKMCKVTFRV PGKASMGAKT VNLAGDFNHW SVTDSPMKKL KNGDFTLTLN
LKTGKEYQFR YLMDEKVWEN DWEADKYVRS EYGNCENSVV VV
|
|---|
| |