Gene Dole_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0811 
Symbol 
ID5693646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp938544 
End bp939677 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content60% 
IMG OID641263408 
ProductABC-2 type transporter 
Protein accessionYP_001528698 
Protein GI158520828 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TCTTCTATCT GGTGCGAAAA GAGCTGTGGC AGGTCTTTCG GGACATCAAC 
ATGCTGCGCA TCATTTTTAT CGTGCCCATG GTTCAGTTGT TCGTGCTGGG CTATGCCATC
ACCACGGACA TCAAGAACCT GGATATCCTG ATCTGCGACT ACGACAATTC TGCCCTTTCC
CGGAACCTGG TGGAGCGGTT TTCCCACACC GACTACTTTG ACGTTGCCAA AAGCGGCTGC
GCGCCGGGCC ATGTGGAGCA CCACCTGTTT ACCGGCCGGG CCGATCTCGC CCTGGTGATT
CCCGACCGGT TCGGCCGGGA CCTGGAGACC GGCAACCGGC CCGAGGTGCA GATCCTGGTG
GACGGCCAGA ACTCCAACAC TGCGGCCGTG GCCGCCGGCT ACACAAACCG CATCCTGTTT
GCCTTCATGC AGGACCATGC GGCAACCCCC GCCATGGCCG GGGCCTTTGT CGCGGCATCC
CGGCCCCGCT TCATCTCCCC GGAGGGCCGG GTCTGGTACA ACCCGGAATT AAAGAGCGTC
TACTATATGA TCCCCGGCAT CATCTCCATC CTTTTAACCA TCGTGACCAT GCTGCTTACC
AGCCAGGCCA TTGTCAAGGA GCGGGAGATC GGCACCCTGG AGCAGTTGAT GGTGGCGCCC
CTGTCCCCCT GGCAGATCAT TGCGGGCAAG ACCATTCCCT TTGCCGTGCT GGGGTTTATC
GAGATGGGGG TGGCCATGAC CTTTGGCGTG CTCTGGTTTT CGGTCCCCAT CGTGGGCAGC
CTGCCCCTGC TGGCGCTGAT GGCCGCGGTC TTTATCCTGA CCACCCTGAG CCTGGGCATC
TTTATCTCCA CCCTGGTGGA GACCCAGCAG CAGGCCCTGT TTGTCTCCTG GTTTTTCCTG
GTCTCCTTTA TCCTGCTGTC CGGCTTTTTC TATCCCATCG ACAACATGCC CGGCTGGGTC
CAGGTGATCA CCTATCTCAA CCCGCTGCGC TATTTTATTG AGATCCTGCG GGAGCTGTTT
TTAAAGGGCG CCGGCCTGGA TGTGCTGTGG CCGGAGCTGG CCTGCCTGGC CGCCATTGCA
ACGGCCGTTT TTACCCTGGC CATCGTCCGG TTCCGCAACC GCAGCCGGGC GTAA
 
Protein sequence
MKKVFYLVRK ELWQVFRDIN MLRIIFIVPM VQLFVLGYAI TTDIKNLDIL ICDYDNSALS 
RNLVERFSHT DYFDVAKSGC APGHVEHHLF TGRADLALVI PDRFGRDLET GNRPEVQILV
DGQNSNTAAV AAGYTNRILF AFMQDHAATP AMAGAFVAAS RPRFISPEGR VWYNPELKSV
YYMIPGIISI LLTIVTMLLT SQAIVKEREI GTLEQLMVAP LSPWQIIAGK TIPFAVLGFI
EMGVAMTFGV LWFSVPIVGS LPLLALMAAV FILTTLSLGI FISTLVETQQ QALFVSWFFL
VSFILLSGFF YPIDNMPGWV QVITYLNPLR YFIEILRELF LKGAGLDVLW PELACLAAIA
TAVFTLAIVR FRNRSRA