Gene Dole_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0738 
Symbol 
ID5693573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp858102 
End bp859997 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content61% 
IMG OID641263335 
Producthypothetical protein 
Protein accessionYP_001528625 
Protein GI158520755 
COG category[R] General function prediction only 
COG ID[COG3972] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGAC GTGTTTCACC GCCGGTCAAC GAACTCGACA GCCTGCCTCA CCCACTGACT 
TCGGGCGAAC GGCGGGTGTT TGATTTTTTT AACGCCCGGC TTGCGCCCGA ATGGGAAATC
TACGTTCAAC CCCACTTAAA CGGATTGCGG CCCGACTTTG TGCTGCTGCA TCCCCGGATC
GGGGTCGCCG TGTTCGAGGT AAAAGACTGG AGCCTGAATG ACGCGGCCTA CCAGGTCCAA
AAACGGGAGG ACGGCACGCC CGTGCTGATG GTAAACGACC ATGGAGAGTG GCGCGCCATT
GAACAGGCAA ACCCGGTTGA AAAAATTCTT CACTACAAGC AGGAAATCTT TGACCTCTAC
TGTCCCCGCC TGGACCAGCG GGCCGGACGG GCCGTGATGA CCGCCGGCCT GATCTTTCCT
TCCACCGGCG ATCGGCGGGT GCGGGAGTTT TTCGAACCGT GGCTGCGCCG CCACCGCGAG
ATCGTGCAAT ACCCCGGCCG CCATCCGGTG ACGGGCATGG AGGCCATTGA CGGCGGCCGG
ATTGACCAGG TTTTTCCCGA GCACAACCGG GGTCTCTCAA AAATCATGAA TGAAACCCTG
GCCAGGGACT TAAGGAGCTG GCTGGTTGAA CCCGACTTTG CCCTTGCGCA ACGGGAGCCG
CTGGATATGG ACAAAAACCA GAACAACCTT GTCACGTCGC GGACCGATAC CGGATACCGC
CGCATCAAGG GCCCGGCTGG GTCGGGCAAG TCCCTGGTGC TGGCGGCCCG GGCAGTGGAA
CTGGCCAACG AGGGCAAGGA CGTGCTGGTG GTCAACTACA CCATCACCCT GCCGCACTAC
CTTCGGGACC TGGCGGCCCG CTGTCACCGA AACGGCGAGG GCCGGGGGAG CATCACGTGG
CTGAATTTTC ACGCCTGGTG CAAGCGGGTG TGTATACAGG CCGGCTTCAA AAAGGAGTAC
GACAACCTTT TTGCCGAGAT CCGTTCGGCA GAACGGAGAG AGCCGGACAA AAAGAACAAC
GGGTTGAAAG AAATCATGGA TCATCGTATC CCCGACCTTG TGGACCGGAT CATCAGCCGA
AACCTGGGCC ATCCGGACAC GATCTACGAC GCGGTTTTAC TGGATGAGGC CCAGGACTTT
CAACTGAAAT GGTGGAACCT GTTAAGAAAG GTGTGTCGCC AGGGCGGTGA AAAGCTGCTG
GTGGCGGACG CCACCCAGGA CATATACGGA ACGGCCCGTG TATGGACCGA GGAGGCCATG
CACGGCGCCG GTTTCAGAGG CGACTGGGTG CGGCTTGCAA CCAGTTACCG TCTGCCGCCC
AAGGCCGTGC AATACGCCCG GGAATTTGCC AGCCGGTTTC TGGACCCCGA CCTGATCGAC
CTGCCTGAAA AAGCCCAGGG CGAACTGGAC ATCTACCCCT GCAACCTGAA ATGGGTTCAA
ACAGACAGCG CCCGGGCCGA AGCGGCGTGC CTGCGGGAAA TTCTGGCCAT GGCCCCGGCC
GCGGATCCGG AGCTGCTGGC CATGACGGAT ATCACTTTTC TGGCCCCCAG CCAGAAATCG
GGTATGGCGG TGGTCGCGCA CCTGAAGGGC CAATACAATA TAGCGTGCGT GGATACGTTT
GACGACGACA GCCAGGCGTG CCGGAGAAAA AAGATGGGGT TTTTCATGGG CGACGCGCGC
GTCAAGGCCA CCACCCTGCA CAGCTTCAAG GGGTGGGAAT CGCGGGCCAT GGTGGTGCTG
ATCAACACCG CGGACAACCA CCGGGCACTG GCCCTGGTCT ACACGGGGTT GACCCGCCTG
AAGCGGCATG TGCGCGGCAG TTTTTTGACG GTGGTGTCGT GCGCGCCGGA GCTGCGTGAA
TACGGTGCCT CCTGGCCGGA CTTCCTGGAA CAGTAA
 
Protein sequence
MPRRVSPPVN ELDSLPHPLT SGERRVFDFF NARLAPEWEI YVQPHLNGLR PDFVLLHPRI 
GVAVFEVKDW SLNDAAYQVQ KREDGTPVLM VNDHGEWRAI EQANPVEKIL HYKQEIFDLY
CPRLDQRAGR AVMTAGLIFP STGDRRVREF FEPWLRRHRE IVQYPGRHPV TGMEAIDGGR
IDQVFPEHNR GLSKIMNETL ARDLRSWLVE PDFALAQREP LDMDKNQNNL VTSRTDTGYR
RIKGPAGSGK SLVLAARAVE LANEGKDVLV VNYTITLPHY LRDLAARCHR NGEGRGSITW
LNFHAWCKRV CIQAGFKKEY DNLFAEIRSA ERREPDKKNN GLKEIMDHRI PDLVDRIISR
NLGHPDTIYD AVLLDEAQDF QLKWWNLLRK VCRQGGEKLL VADATQDIYG TARVWTEEAM
HGAGFRGDWV RLATSYRLPP KAVQYAREFA SRFLDPDLID LPEKAQGELD IYPCNLKWVQ
TDSARAEAAC LREILAMAPA ADPELLAMTD ITFLAPSQKS GMAVVAHLKG QYNIACVDTF
DDDSQACRRK KMGFFMGDAR VKATTLHSFK GWESRAMVVL INTADNHRAL ALVYTGLTRL
KRHVRGSFLT VVSCAPELRE YGASWPDFLE Q