Gene Dole_0725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0725 
Symbol 
ID5693560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp848516 
End bp849013 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content59% 
IMG OID641263322 
Productribosomal protein S5 
Protein accessionYP_001528612 
Protein GI158520742 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.104359 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTAAAG AGACCAATAA GGAAGAGAGC CAGTTTATCG ATAACGTGGT CCACATTCGG 
CGGGTGTCGA AGGTGGTCAA GGGCGGGCGC AAGTTCCGTT TCAGTGCCGT TGTGGTGGTA
GGCGATGGAA ACGGCAACGT GGGCTGCGGC CTGGGAAAAG CCCACGAGGT TCCCGAGGCG
ATCCGCAAAG GCGCTGAGAA GGCCAAGCGG GACATGGTTT CCGTTCCCCT GGTGGAAGGC
ACCATTCCCT TTAAGATTAT CGGAAGATTC GGCGCCGGAC GTGTCATGCT CAAGCCTGCC
GCAAGAGGAA CCGGCCTGAT TGCCGGCGGT GCCGTGCGTG CCGTGCTGGA GGCCGCCGGT
GTGACGGATA TTTTAACCAA GTGCATGGGA ACCCACAATT CGCACAACGT AGTTAAGGCC
ACCATTCGGG GGTTGCAGCA GTTGCAGACC CGTGATCAGA TCGCAGCCCG GCGGGGTATA
CCGGTGGAAG AGCTGTAG
 
Protein sequence
MFKETNKEES QFIDNVVHIR RVSKVVKGGR KFRFSAVVVV GDGNGNVGCG LGKAHEVPEA 
IRKGAEKAKR DMVSVPLVEG TIPFKIIGRF GAGRVMLKPA ARGTGLIAGG AVRAVLEAAG
VTDILTKCMG THNSHNVVKA TIRGLQQLQT RDQIAARRGI PVEEL