Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0704 |
Symbol | rpsL |
ID | 5693539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 838176 |
End bp | 838547 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263301 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_001528591 |
Protein GI | 158520721 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000738801 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTACGA TTAATCAGCT GGTACGCAAC GGAAGAAAGC GGGCAACCAA GAAGACAACC ACCCCGGCAC TGAAGGGGGC TCCCCAGAAG CGGGGGGTAT GCGTGCGGGT GTATACCACC ACGCCGAAGA AGCCGAACTC GGCTTTGCGT AAAGTGGCCA GGGTGCGGTT GACCACCGGT ATTGAGGTCA CTGCCTATAT CCCGGGTATC GGCCACAACC TTCAGGAGCA CTCGGTGGTG CTGGTTCGCG GCGGCCGCGT AAAGGACCTT CCGGGCGTTC GGTACCACAT CGTACGGGGT ACCCTGGACA CCCTGGGCGT CAGTGACAGG AAGCAGGGCC GGTCCAAGTA CGGCACAAAG AGACCCAAAT AA
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Protein sequence | MPTINQLVRN GRKRATKKTT TPALKGAPQK RGVCVRVYTT TPKKPNSALR KVARVRLTTG IEVTAYIPGI GHNLQEHSVV LVRGGRVKDL PGVRYHIVRG TLDTLGVSDR KQGRSKYGTK RPK
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