Gene Dole_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0704 
SymbolrpsL 
ID5693539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp838176 
End bp838547 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content60% 
IMG OID641263301 
Product30S ribosomal protein S12 
Protein accessionYP_001528591 
Protein GI158520721 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000738801 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTACGA TTAATCAGCT GGTACGCAAC GGAAGAAAGC GGGCAACCAA GAAGACAACC 
ACCCCGGCAC TGAAGGGGGC TCCCCAGAAG CGGGGGGTAT GCGTGCGGGT GTATACCACC
ACGCCGAAGA AGCCGAACTC GGCTTTGCGT AAAGTGGCCA GGGTGCGGTT GACCACCGGT
ATTGAGGTCA CTGCCTATAT CCCGGGTATC GGCCACAACC TTCAGGAGCA CTCGGTGGTG
CTGGTTCGCG GCGGCCGCGT AAAGGACCTT CCGGGCGTTC GGTACCACAT CGTACGGGGT
ACCCTGGACA CCCTGGGCGT CAGTGACAGG AAGCAGGGCC GGTCCAAGTA CGGCACAAAG
AGACCCAAAT AA
 
Protein sequence
MPTINQLVRN GRKRATKKTT TPALKGAPQK RGVCVRVYTT TPKKPNSALR KVARVRLTTG 
IEVTAYIPGI GHNLQEHSVV LVRGGRVKDL PGVRYHIVRG TLDTLGVSDR KQGRSKYGTK
RPK