| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0694 |
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| Symbol | |
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| ID | 5693524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 821988 |
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| End bp | 823775 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641263286 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001528581 |
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| Protein GI | 158520711 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000324493 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAGAC CCGTTTTTAA AAGCGTTGTA TTCATTCTGA TTCTGACCCT GACAGGCACG
GGGTGTCTGT CAACTTTATC TGAAAAAACA GGGGGTTTCC CGTTTACACG AAAAACCCCG
GTCGTCTGCG AAGCCGACAC CGCCGAGGCG GTGGACGGTC CGGTGGACGT CACCCTGTCC
GCCGAGGCCC CGGACCAGAT CCTGGAGGCC ACGGAACCGG CCGGCGAAGT CAATGAGACC
CAGAAAGCCA TGGACGAGGC ACTGGACCTC TGCAAGGTTT CCCAGGACTT CTGGCAGAAG
GGGGAGTTTG ACAACGCCAT TCAGGCCCTG GACCAGGCAT ACGCCCTGAT GCTCAAAGGG
GATGTCGAGA GCGACGTCCA GCTCTTGCAG CAGAAGGAGG ATATCCGGTT TCTGATCTCA
AAACGGATCC TGGAGATCTA CACCTCCCGC ACCACCGTGG TCAACGGAGC CCACAACGCC
ATTCCCGTGA CCATCAACCG GGAAGTGCAA AAAGAGATCG ACCTGTTTAC CACCGGCCCG
GAGCGGTCTT TTTTTATCGC CTCCTACCAG CGTTCGGGAA AATACCGGCC CCATATTCTC
AAAAAACTGG CCGAGGCCGG GCTGCCCGCC GAACTCTCAT GGCTGCCCCT GATCGAAAGC
GGCTTCAAAA CCAACGCCCT GTCCAAGGCC CGTGCCCTGG GGCTGTGGCA GTTCATCCCC
TCCACGGGAT ACAAATTCGG CCTGGAGCGC AACCTTTACG TGGACCAGCG GCTGGACCCG
GAACGGGCCA CCGACGCCGC CATTGATTAC CTCACGGCCC TGCACAGAAT TTTCGGCGAC
TGGGCAACGG CCCTGGCCGC CTACAACTGC GGCGAAGGAA AAGTGCTTCA GGTGATCCGG
GACCAGCGGG TGAATTACCT GGACAACTTC TGGGACCTCT ACCACCGGCT GCCCCGGGAA
ACGGCCCGTT ACGTGCCCCG GTTCCTGGCC ACCCTGCACA TCGTTTCCAA CCTGGAAAAA
TACGGTATGG ACACGGTGGT GCCGGAAGAT CCGATCTCCT ACGAAGTGGT GGAAACCGCC
CGCCAGGTCC ATTTGAAAAA AATCGCCGAG GCAACCGGCA TCGCCTACGA CCTGCTCAAC
GAGCTGAACC CGGAGCTGCG CCAGAACATC CTGCCGCCCA GTGCCTACCC CCTGCGGGTG
CCCGCGGAAA AATCGGAAGC AGTGGTGGCC AGTATCAACT CTCTGCCCGT CACCGAACCG
GCCCAGACCC AGTTTGCCTA CCACCGGGTC CGGTCCGGCG AGACCCTGTC CACCATTGCC
CGGCGATACC GCACCTCGGT CTCCAACATC GCCCGGGCCA ACAATATTTA CAAACGCAAC
TTCATCGTGG CCGGCAAAAT TCTCAAGATT CCCCTTTCCA GCAACTGGGT GGCCACCAAG
ACCCAGAAAT TTGAAAAGGC CTCGGAAATA CCGGCGAGCC ACCGGGTGCG AAGCGGTGAG
TCGCTCTGGA TTCTTGCCAA CCGTTACAGC ACCACGGTCA ACGCTATTCA GCGGTTAAAC
GGCCTGTCCG GGACCAGCCT GCGCGTGGGC CAGGTCCTGA AAATCCCCGG CGGTGGCGCG
GCCCCGGCAA CCGCGGCCGG CGACGGTAAA ACCTACACGG TACGGGCCGG CGACAGCCCC
TTTACCATTG CCAGAAGCCA CAACATTCCC TTAAACCGCT TTCTTCAGAT CAACAACCTG
AGTACGCGAA GCACCATCTA TCCGGGCCAG CAGGTCTGCC TGGAGTAG
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| Protein sequence | MPRPVFKSVV FILILTLTGT GCLSTLSEKT GGFPFTRKTP VVCEADTAEA VDGPVDVTLS
AEAPDQILEA TEPAGEVNET QKAMDEALDL CKVSQDFWQK GEFDNAIQAL DQAYALMLKG
DVESDVQLLQ QKEDIRFLIS KRILEIYTSR TTVVNGAHNA IPVTINREVQ KEIDLFTTGP
ERSFFIASYQ RSGKYRPHIL KKLAEAGLPA ELSWLPLIES GFKTNALSKA RALGLWQFIP
STGYKFGLER NLYVDQRLDP ERATDAAIDY LTALHRIFGD WATALAAYNC GEGKVLQVIR
DQRVNYLDNF WDLYHRLPRE TARYVPRFLA TLHIVSNLEK YGMDTVVPED PISYEVVETA
RQVHLKKIAE ATGIAYDLLN ELNPELRQNI LPPSAYPLRV PAEKSEAVVA SINSLPVTEP
AQTQFAYHRV RSGETLSTIA RRYRTSVSNI ARANNIYKRN FIVAGKILKI PLSSNWVATK
TQKFEKASEI PASHRVRSGE SLWILANRYS TTVNAIQRLN GLSGTSLRVG QVLKIPGGGA
APATAAGDGK TYTVRAGDSP FTIARSHNIP LNRFLQINNL STRSTIYPGQ QVCLE
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