Gene Dole_0626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0626 
Symbol 
ID5693455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp744366 
End bp745526 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content60% 
IMG OID641263217 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001528513 
Protein GI158520643 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000265202 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCCAC TTTCCGGTCC CCCCTGCCAG GCCTATTTTT CGGCGGAGCA TAACATGCTG 
CGCAGCGCGT TGCGGGAGTT TGTCAAAAAA GAGATCACGC CCTTCGTGGA TGAGTGGGAG
CGAGCCGGAG AGTTCCCCCG GGACCTTTAC AGGAAGATGG GTGATCTGGG ATTTCTCGGC
ATCGGTTTTC CGGAGGATTT CGGCGGCAGC GGCGGGGATA TTTTTTCCAC CATCGTTTTA
AATGAGGAGA TGATGCGGTG CGGCGCCGCC GGTATCGTGG CCGGCCTGGG CTCCCACGGC
ATCGGCCTGC CGCCCATTGC CATGAAGGGT ACCCCGGACC AGGTCGACCG CTTTGTGCGG
CCGGTGCTGG CCGGAGAAAA AATCGCGGCC CTGGGCATCA CCGAGCCCGG TGGCGGGTCG
GACGTGGCCA ACCTTCAGAC CACGGCGGTG CGGGACGGCG ATGACTATAT CGTCAACGGC
TCAAAGACTT TTATCACCAG CGGCATTCGG GCCGATCAGC TCACCTGTGC GGTCCGCACC
GGCGACAAGG GGGCCCACGG CATCAGTTTT CTGGTCATTG AGGCCGACAC GCCGGGCTAT
GCCACGGGCA GAAAGCTTGA AAAGATGGGG TGGCTGGCCT CGGACACCGG CGAAATCTTT
TTTGACAACT GCCGGGTGCC GGTGGCCAAC CGTATCGGCG AAGAGAACTC CGGGTTTTAC
ACCATCATGG AGAACTTCCA GATGGAACGG CTTCACCTCT GTGTCATGGC CAACATGACG
GCCCAGTTGG CCCTGGAGGA GTCTATTAAA TACGCGAAGC AGCGGCAGGC CTTTGGCAAG
CCCCTCAAGG GGTTCCAGGT GACCCGCCAC AAGCTGGTGG ACATGGCCAC CCTGGTGGAG
GCCAGCCGGG AGTTCACCTA CCGGGTGGCG GCAAAAATGA ACGCCGGCCA AAACCAGGTC
AAGGAGATCT CCATGGCCAA GAATTTTGCC TGCCAGGTCA GCGACAAGGT GACCTATGAC
GCGGTCCAGA TTTTCGGTGG CTACGGCTAC ATGAAAGAAT ACATGGTGGA GCGGCTCTAC
CGGGACAACC GGATACTTTC CATCGGCGGG GGAACCACCG AGATCATGAA AGAGATCATC
GCCAATTTTG TGGTGGGGTA G
 
Protein sequence
MNPLSGPPCQ AYFSAEHNML RSALREFVKK EITPFVDEWE RAGEFPRDLY RKMGDLGFLG 
IGFPEDFGGS GGDIFSTIVL NEEMMRCGAA GIVAGLGSHG IGLPPIAMKG TPDQVDRFVR
PVLAGEKIAA LGITEPGGGS DVANLQTTAV RDGDDYIVNG SKTFITSGIR ADQLTCAVRT
GDKGAHGISF LVIEADTPGY ATGRKLEKMG WLASDTGEIF FDNCRVPVAN RIGEENSGFY
TIMENFQMER LHLCVMANMT AQLALEESIK YAKQRQAFGK PLKGFQVTRH KLVDMATLVE
ASREFTYRVA AKMNAGQNQV KEISMAKNFA CQVSDKVTYD AVQIFGGYGY MKEYMVERLY
RDNRILSIGG GTTEIMKEII ANFVVG