Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0625 |
Symbol | |
ID | 5693454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 743124 |
End bp | 744197 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641263216 |
Product | aminodeoxychorismate lyase |
Protein accession | YP_001528512 |
Protein GI | 158520642 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0512441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACAAGTG CCCGTCACCT TACCGTACAC GTTTACCCAT GGTTGAAAGC AGGACAAATG CCGGCACCCA AACGCATCCT TATTCTTGTT GTCATACTGG CCGTCGCCGG CGCAGGGGCA TGGTTCGGTC TGCTTCGGTA CGGCGCCACA CCCGCCGATC CCGGTGCCCG CAATGAACAG GTACTGGTAG TTGCCCCGGG CATGGGCATC AACGCCGTGG CGACCCTGCT GCACCGGGCC GGGATTATCC ATCACCCGGA TCTGTTCCGG CTCTTTGCCC GAACAGCCCG GGGCAGACAC GTCATCAAGG CAGGAGAATA CCGGGTGTCG GCGGCCATGC CGCCGTCGGA CATCCTGGAC CGGCTCTTTT CCGGGGACGT GGTGCTCTAC CGGGTAACCA TTCCCGAAGG TTTCGCCATT GACCAGATTG CCGGCGCAGT GGCCCAGGCC GGGCTGGCCA CAAGCGAGGC TTTTGCCGCT GCCGCCAGGG ACAGCGGGCT TGCAAAAGAG ATGGGCATTC CGGCCGACAC ATTGGAAGGA TACCTGTTTC CCGAGACCTA CTATTTTCCG GCAACCGCCA CTCCCCGAAA AATGGCGACC GCCATGGTGG ACCGCTTTAA CGCCGTATTC ACCGACGAGT GGAAAACACG CGCCACACAA CAGGGATTTT CGGTCCACCA GATCGTGACC CTGGCGTCGA TCATTGAAAA AGAGACGGCC CACCCGGACG AACGGCCCGT GATCGCGTCG GTGTTCCACA ACCGGCTGGC AAAAAGAATG CGGCTGGAGA GCGACCCCAC GGTGATATAC GGCATTCCCG ACTTTGACGG CAATATCACC CGTGCCCATC TGCGACAGGA AACCCCTTAC AACACCTACC GGATTCGGGG TCTTCCGCCG GGGCCCATTG CCAGCCCGGG CAAAGAATCG CTCTACGCGG CCCTTTTTCC GGCCCAAACC GGCTATCTCT ATTTTGTGGC AAAAAACGAC GGCACCCACC ACTTTTCCGC CACCCTTGCA GAGCACAACC GGGCCGTTCA GACATATCAA CTGGGAAGGC GGCGTAAAAA ATAG
|
Protein sequence | MTSARHLTVH VYPWLKAGQM PAPKRILILV VILAVAGAGA WFGLLRYGAT PADPGARNEQ VLVVAPGMGI NAVATLLHRA GIIHHPDLFR LFARTARGRH VIKAGEYRVS AAMPPSDILD RLFSGDVVLY RVTIPEGFAI DQIAGAVAQA GLATSEAFAA AARDSGLAKE MGIPADTLEG YLFPETYYFP ATATPRKMAT AMVDRFNAVF TDEWKTRATQ QGFSVHQIVT LASIIEKETA HPDERPVIAS VFHNRLAKRM RLESDPTVIY GIPDFDGNIT RAHLRQETPY NTYRIRGLPP GPIASPGKES LYAALFPAQT GYLYFVAKND GTHHFSATLA EHNRAVQTYQ LGRRRKK
|
| |