Gene Dole_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0625 
Symbol 
ID5693454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp743124 
End bp744197 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content60% 
IMG OID641263216 
Productaminodeoxychorismate lyase 
Protein accessionYP_001528512 
Protein GI158520642 
COG category[R] General function prediction only 
COG ID[COG1559] Predicted periplasmic solute-binding protein 
TIGRFAM ID[TIGR00247] conserved hypothetical protein, YceG family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0512441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAAGTG CCCGTCACCT TACCGTACAC GTTTACCCAT GGTTGAAAGC AGGACAAATG 
CCGGCACCCA AACGCATCCT TATTCTTGTT GTCATACTGG CCGTCGCCGG CGCAGGGGCA
TGGTTCGGTC TGCTTCGGTA CGGCGCCACA CCCGCCGATC CCGGTGCCCG CAATGAACAG
GTACTGGTAG TTGCCCCGGG CATGGGCATC AACGCCGTGG CGACCCTGCT GCACCGGGCC
GGGATTATCC ATCACCCGGA TCTGTTCCGG CTCTTTGCCC GAACAGCCCG GGGCAGACAC
GTCATCAAGG CAGGAGAATA CCGGGTGTCG GCGGCCATGC CGCCGTCGGA CATCCTGGAC
CGGCTCTTTT CCGGGGACGT GGTGCTCTAC CGGGTAACCA TTCCCGAAGG TTTCGCCATT
GACCAGATTG CCGGCGCAGT GGCCCAGGCC GGGCTGGCCA CAAGCGAGGC TTTTGCCGCT
GCCGCCAGGG ACAGCGGGCT TGCAAAAGAG ATGGGCATTC CGGCCGACAC ATTGGAAGGA
TACCTGTTTC CCGAGACCTA CTATTTTCCG GCAACCGCCA CTCCCCGAAA AATGGCGACC
GCCATGGTGG ACCGCTTTAA CGCCGTATTC ACCGACGAGT GGAAAACACG CGCCACACAA
CAGGGATTTT CGGTCCACCA GATCGTGACC CTGGCGTCGA TCATTGAAAA AGAGACGGCC
CACCCGGACG AACGGCCCGT GATCGCGTCG GTGTTCCACA ACCGGCTGGC AAAAAGAATG
CGGCTGGAGA GCGACCCCAC GGTGATATAC GGCATTCCCG ACTTTGACGG CAATATCACC
CGTGCCCATC TGCGACAGGA AACCCCTTAC AACACCTACC GGATTCGGGG TCTTCCGCCG
GGGCCCATTG CCAGCCCGGG CAAAGAATCG CTCTACGCGG CCCTTTTTCC GGCCCAAACC
GGCTATCTCT ATTTTGTGGC AAAAAACGAC GGCACCCACC ACTTTTCCGC CACCCTTGCA
GAGCACAACC GGGCCGTTCA GACATATCAA CTGGGAAGGC GGCGTAAAAA ATAG
 
Protein sequence
MTSARHLTVH VYPWLKAGQM PAPKRILILV VILAVAGAGA WFGLLRYGAT PADPGARNEQ 
VLVVAPGMGI NAVATLLHRA GIIHHPDLFR LFARTARGRH VIKAGEYRVS AAMPPSDILD
RLFSGDVVLY RVTIPEGFAI DQIAGAVAQA GLATSEAFAA AARDSGLAKE MGIPADTLEG
YLFPETYYFP ATATPRKMAT AMVDRFNAVF TDEWKTRATQ QGFSVHQIVT LASIIEKETA
HPDERPVIAS VFHNRLAKRM RLESDPTVIY GIPDFDGNIT RAHLRQETPY NTYRIRGLPP
GPIASPGKES LYAALFPAQT GYLYFVAKND GTHHFSATLA EHNRAVQTYQ LGRRRKK