| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0611 |
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| Symbol | |
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| ID | 5693440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 689453 |
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| End bp | 690847 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641263202 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001528498 |
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| Protein GI | 158520628 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAG CCGTAAGTGC CAGACGCTGT GTTCGAAGAA AGATTGTCTC TGGAATCACA
ACAGGTGCAT TGACTGTGGC GTTGTTGTGT TTAGCCGGAG TGCCGTCCGT TCTGTATGCC
GCCGATCTTA TGACGGTGTT CAACCAGGCA TTGGAGAACG ACCCCCGTTT CGTGGGTATG
CGCCACGAAA GAGACGCGGA GCAGGAGCGG CTGCGCCAGG CGTGGGCCGG GGTCCTGCCC
TCCCTGTCCG CGGAAGGGGT CCACAAGGAA ACCGCCCAGG ACATCGTCAG TTCCGATAAT
ACGGTTTTTG GATCCGGCAG TTCTGATTTT CCCACCACTG AATATACCCT TTCCCTTACG
CAGCCCCTGT TTAACCTTTC CTCCTTTATC AACATTCGTC GCGCCAGCGC CCTTGTCAGG
GGTGCCGACC TGGAACTGGA GGCGGCCCGC CAGGAGCTGG CCGTGCGTGT GGCCCAAGCC
TATTTCCATG CGCTGGCGGC CCGGGACCGG CTGACGGCCA CGGCGGCCGA GGAGGCCGCG
GTGGGCGGTC ATTACGAACT GGTGAACGAA CGGTTCAACC GGGGGCTCTC CACTCGAACG
GAATATTATG ACGCAAAGGC CCGGCTGGCC GATATAATGG CCAGGCGCCT GACAGCGGAA
AGCGACCTGG ATGATGCTTA CCAGGCCCTT GCCGAAATTA CCGGTTCTCC GGTGGAGGAT
CTTTCTCTGC TGCACGAGGA ACTACCCCTG GTCTCGCCCG ATCCCGTTGA TGCCGACGCA
TGGATTGAGG CGGCGGTCAG GCAGAATCCG TCACTGGAGG CCGTGCGTCA GTCCGTGGCA
TCGGCCCGGC AGGAGGTCCG GCGCCAGCGG GCCGGCCACT ACCCGAACGT GAACCTGGAA
GCCAGCCACA ACTGGCGTGA AACCGACGGT ACCCTTTTCG GCGGCGGCAG CGAGGTGGAA
ACGTCCGAAA TTCTGTTCCG GCTGAACGTG CCCCTCTACC AGGGCGGCAT GGTGAACTCC
CGCACCCGGG AGGCGATTTG TCGCATGAAC GCCTTACTTC AGGAGGAATC GCGGCAGACC
CGTGCCCTTC AACGTGAAAC CCGGGCCGCC TTTTACGGCG TGGACAACGC CATTGAACGG
GTCCGGTCCC TGAGAGATGC GGTAGAGGCC CAGCAACTGG CCCTGGAGGG AAAAAAGGAG
GGGCACCGGT CCGGACTCTT TACGGTTCTG GCGGTTCTGG ACGCGGAGCG GGATCTGTCG
CTGGCCCGCC AGAACTATGC CATGGCCAGA TACGACTACA TCATCAACAG CCTGGTGCTC
AAAAAAACCG TGGGTACGCT GGATGATGCC AATATTGCCG GCGTTAACGG CTGGCTGAGG
AATGTTTCCG AGTAA
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| Protein sequence | MEKAVSARRC VRRKIVSGIT TGALTVALLC LAGVPSVLYA ADLMTVFNQA LENDPRFVGM
RHERDAEQER LRQAWAGVLP SLSAEGVHKE TAQDIVSSDN TVFGSGSSDF PTTEYTLSLT
QPLFNLSSFI NIRRASALVR GADLELEAAR QELAVRVAQA YFHALAARDR LTATAAEEAA
VGGHYELVNE RFNRGLSTRT EYYDAKARLA DIMARRLTAE SDLDDAYQAL AEITGSPVED
LSLLHEELPL VSPDPVDADA WIEAAVRQNP SLEAVRQSVA SARQEVRRQR AGHYPNVNLE
ASHNWRETDG TLFGGGSEVE TSEILFRLNV PLYQGGMVNS RTREAICRMN ALLQEESRQT
RALQRETRAA FYGVDNAIER VRSLRDAVEA QQLALEGKKE GHRSGLFTVL AVLDAERDLS
LARQNYAMAR YDYIINSLVL KKTVGTLDDA NIAGVNGWLR NVSE
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