| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0560 |
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| Symbol | |
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| ID | 5693384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 628425 |
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| End bp | 630194 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641263146 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001528447 |
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| Protein GI | 158520577 |
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| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases
[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACCA CCGTTGCCAT CACCGGCGTT AACAGCTACT TTGCATCCAC TATCCTGCCG
CTGCTGGAAA CCGATCCTGA CGTGGATAAA GTCATCGGCA TTGACGTGTC ACCCTGGAAA
GGGGGATATG GCAAGGTTGA GTTCCACCGG GCCGATATTC GGGACCCCCA GATCGCCGAC
ATCCTGGCCG GGGCCGACGT GGTGTATCAC CTGGCCTTTA TCGTGGGCCA GATTCAGGAC
ACTCAAAAAG CCCTGGACAT TAACATCAAC GGCAGTCGCA ACGTGTTTGA GTCCTGCGTG
AAGAACAACG TGTCCAAGGT GATCTACACC AGCTCCTCCA CGGTCTATGG CGCCCATGCG
GATAATCCCA TCGGTTTTCG CGAAGACGCC CCTCTGCGCG TCAACGAGGA CAGCTACTAC
AACGAAAGCA AGGTCAAGGT CGAAACCTTT GCCCGGGATT TTTTCCGCAA CCATCCCGAT
ATCACGTTTA CGGTCATTCG GTCGGCCCTG CTGTTCGGCC CTCACATCGA CAACATGTTT
TCAAAGCTTT ACGACCTGCC GGTGTCGTCC CTTCCCATGG GCCGCACCAC CCACAACCAG
TACATTCACG AAGAAGACCT GGGCAGCGCC CTTCACATGG CCATGGCCTG CGACCTGCCC
GGCATCTACA ACGTGGGGGC CGACGACGGC ATGGCTACCC GGCACGCCTT TGCCATGGCC
GGGGTCCGCA TCATTCCGGT GCCCACAAGC CTGCTCAAGC TGGTGGCGGC CGTTGGGTTC
AAGCTGCGCC TGTTTTCGGC CGGCCGCGGC TGGGTCAGCC TGGGCGAATA CACCATCTTC
ATGAATTGCG ACAAGTTCAA GCAGGCCACC GGGTGGAAAC CCCGGTACAC CTCCCGCCAG
ACCTTTGAGT CCTTTCTGGC GGCCCGCGAG CGTGACGCCA AAGACAACCC CATTCAGGCC
ACCCTGTCCT GGATATTCAA AAGCGGCCCC CGCACCCGGC CCACCATGGC GGTGCTCAAC
GTGTTCCGGC TGGGAAAGGT ACCCGGTCTT CGGCGGGCCA TTCCCTGGAT GAACCCCAAA
AAGAACAGCA TGAGCTACCT GCCGGTCAAC CGCAGCCTGG GCCAGGTGGT GGACCAGGTG
CTGCCCGCCC AGGTGGTGCA CGATTTTATC GACGCCGCCG ACACCTATGT CATCATGGAC
AAGTGTGGCT GCCGGCTGGC CCGAAAGTGC CAGCACCACA CCCCGGACAT CGGGTGCCTG
TTCATGGGAG AAACCGCCCT GAAAATGCCC CACGGTGTCA GCCGCCGGGT CACCCGCGAA
CAGGCCCACG CCCACGTGGA CCGGGCCATC AGCGTCGGCC TGATTCCCAT GACCGGCAAG
GTGCGGGTGG ATAACTTCAT CTTTCTTACC CCGGACCGCA GCAAGCTGCT GTCTGTCTGT
TTCTGCTGCC ACTGCTGCTG CATGATGACC TCGCTCAAGC ACATTCCCGG TGACTACCTG
GACGGCATCA TGCCGCGCAT CGAAGGCCTG GAAATCTCTG TCACCGACGC CTGCGTGGGC
TGCGGCACCT GCGTGGAGTT CTGCGGGTTC GGCGCCATCA CCATTGAAAA CGGCAAAGCG
GTGCACAACG ACCAGTGCCG GGGCTGCGGC CGCTGCGAAA CCCGGTGCCC CAACCACGCG
GTCAGAATCA CCATCAACAA CCCCAACGTC ACCGAGGATG TGAAAAAACG GATCGAACAG
TACGTGGACT TCAAGGGAAC AGCGGCCTGA
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| Protein sequence | MGTTVAITGV NSYFASTILP LLETDPDVDK VIGIDVSPWK GGYGKVEFHR ADIRDPQIAD
ILAGADVVYH LAFIVGQIQD TQKALDININ GSRNVFESCV KNNVSKVIYT SSSTVYGAHA
DNPIGFREDA PLRVNEDSYY NESKVKVETF ARDFFRNHPD ITFTVIRSAL LFGPHIDNMF
SKLYDLPVSS LPMGRTTHNQ YIHEEDLGSA LHMAMACDLP GIYNVGADDG MATRHAFAMA
GVRIIPVPTS LLKLVAAVGF KLRLFSAGRG WVSLGEYTIF MNCDKFKQAT GWKPRYTSRQ
TFESFLAARE RDAKDNPIQA TLSWIFKSGP RTRPTMAVLN VFRLGKVPGL RRAIPWMNPK
KNSMSYLPVN RSLGQVVDQV LPAQVVHDFI DAADTYVIMD KCGCRLARKC QHHTPDIGCL
FMGETALKMP HGVSRRVTRE QAHAHVDRAI SVGLIPMTGK VRVDNFIFLT PDRSKLLSVC
FCCHCCCMMT SLKHIPGDYL DGIMPRIEGL EISVTDACVG CGTCVEFCGF GAITIENGKA
VHNDQCRGCG RCETRCPNHA VRITINNPNV TEDVKKRIEQ YVDFKGTAA
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