| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0551 |
|---|
| Symbol | |
|---|
| ID | 5693375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 616751 |
|---|
| End bp | 618085 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641263137 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_001528438 |
|---|
| Protein GI | 158520568 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.138976 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGA TATTATATAT GACGCCCCTG CTGGGTCTGG CCATGTCAGT CAGTGCATGG
GCCGGGGAAG CGGCCATCAC GCCGGCGGCC AACGCCGCTG CCATTGAACT GGTGCAGAGC
CATGCCGACT ACCTCTGGAC CCTGGTTGCG GCGTGCCTGG TCTTTTTCAT GCAGGCCGGG
TTTGCCCTGG TGGAGACCGG CTTTACCCGG GCCAAGAACG CGGTCAATAT TTTAATGAAA
AACCTGATGG ACTTTTCCAT CGGCAGCCTG GTCTTCTGGG CCGTGGGATT CGGCCTGATG
TTCGGGGCCT CGGCCTCCGG ATGGTTCGGC ACCAGCGGGT TCTTCTTAAG TGACTTTTCC
CCGGAAGGGG ATCCCTGGGT CCTGGCCTTC TGGATGTTCC AGGTGGTCTT CTGCGCCACG
GCAGCCACCA TCGTGTCCGG TGCCATGGCG GAACGGACAA AGTTCATCGG CTATATCGCC
TACAGTATCG TGTTAAGCGC CCTGATCTAC CCGGTGTTCG GCAGCTGGGC CTGGGGCAGC
CTGTTCAACG GCGGCGGCTG GCTGGAAGGG TTCGGGTTTA TCGACTTTGC CGGGTCCACG
GTGGTGCACT CGGTGGGCGG CTGGGCGGCC CTGGCAGGTG CCATCGTGCT GGGCCCCCGT
ATGGGAAAGT ACGCAAAGGA CGGCACGGCA CGGGCCATTC CCGGTCACAA CATTCCCCTG
GCGGCCCTGG GCGTCTTTAT CCTGTGGCTG GGCTGGTTCG GGTTCAACCC CGGCTCCACC
ACCGTTGCGG ACAAAAGCAT TGCCATGATC TTTGTCAACA CCAACCTGGC CGCGGCCACA
GGCGCCGTGT TTGCCATGAT CGTCTCCTGG CTCAAGTTCG GCAAGCCGGA AATCAGCATG
AGCTTAAACG GCGCCCTGGC CGGCCTGGTG GGTATCACGG CCGGATGCGC CAACGTGTCG
CCGACCAGTT CCATTATCAT CGGCGCCATT GCCGGTGTGC TGGTGGTGTT CTCCGTTCTC
TTTTTCGACA AAATCAAGGT CGACGACCCG GTGGGCGCGG TATCGGTCCA CGGTGTGTGC
GGGGCCTGGG GAACGCTGGC CGCCGGTATC TTCAACATGG GCGGCACATC GGCGTCCATC
ATCGGCGTGC AGCTTCTGGG CATGGGGACC TGCTTTGCAT GGACCTTTTC CATGGCCTTT
GTCATGTTCA AGCTGATAGA CAAAACCATC GGCCTGCGGG TATCTCCTGA AGAAGAGGCC
GAGGGGCTTG ACTTTTCCGA GCACGGCGGT AATGCCTACC CGGATTTTAG TGTGTCGGCC
TACGCCCAGA AGTAG
|
|---|
| Protein sequence | MKRILYMTPL LGLAMSVSAW AGEAAITPAA NAAAIELVQS HADYLWTLVA ACLVFFMQAG
FALVETGFTR AKNAVNILMK NLMDFSIGSL VFWAVGFGLM FGASASGWFG TSGFFLSDFS
PEGDPWVLAF WMFQVVFCAT AATIVSGAMA ERTKFIGYIA YSIVLSALIY PVFGSWAWGS
LFNGGGWLEG FGFIDFAGST VVHSVGGWAA LAGAIVLGPR MGKYAKDGTA RAIPGHNIPL
AALGVFILWL GWFGFNPGST TVADKSIAMI FVNTNLAAAT GAVFAMIVSW LKFGKPEISM
SLNGALAGLV GITAGCANVS PTSSIIIGAI AGVLVVFSVL FFDKIKVDDP VGAVSVHGVC
GAWGTLAAGI FNMGGTSASI IGVQLLGMGT CFAWTFSMAF VMFKLIDKTI GLRVSPEEEA
EGLDFSEHGG NAYPDFSVSA YAQK
|
|---|
| |