| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0537 |
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| Symbol | |
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| ID | 5693359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 604052 |
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| End bp | 605236 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641263121 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001528424 |
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| Protein GI | 158520554 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000201658 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGA ATGAGCCGGC AGCCCCATCG GCCGGCGATG CCGCCGCCGT GGCACCGGGT
GAGCCCACTG TTCAGGGCAC GGGAACCGAC CCCTTACCAC CGGCTGAGGA CACTTCGGTT
TTTCAGGAAA CGACAACCGG CACTCAGCTT GCTGTAGAAG ATGAGCAGGC GGATCAACCG
GAAGGCGGGG ACTTTGCACC CGGGTTTTAC TACACTGTCC GGCCGGGGGA CACCCTGTGG
GATCTTTCCA GAAAATTTTA CGATTCCGAA TGGGTGTGGC CTGCCATGTG GGGACAGAAC
AAGGATCTGA CCAACCCTCA CCTCATCTAT CCCGGTCAGA AGATTCGGCT CTATCAGAAA
ACCGATGTGC CGGACTACCG GGACAAAATG GTGCCGCCAC CGCCGCCGGA AGAGGAAGTG
GCGGTGGCTC AGTTTATGCC AGAGGAGCAG GCCGCACCAG AGCCTCCGGT GGAAAAGCAA
GTATACTTCG AATTTGCGCC CATCGACTCC GTGGGATTTA TTCAGCGGCT GGAAAAAACG
GTGCTGTCGC GCAACCCTTT GGATCCCTAC AAGCTGGGAA AAATTTTCAA GGTGGAAGGG
TATGACCGAA AACTACTGAG TCAGGGCGAC ACCATCTATA TTCAACAGAC CGGTGACACA
TCCTTTATCA GTGGCAACAC CTACCGGATC TACAAACCGA TCACACCCGT GGATGATCCT
ACCACGGGTA AATATGTCGG GCACCAATAC AATATTGCCG GAATTGCGGA AATCACCGCT
GTTACCCCAG ACTTCGCCGT GGCCAATATT CACAGGTCCT TTCAGGAAAT CACCGTCGGC
GACCTGATCA TGCCTTTTGA ACAACGGGCC CCGAAAATCC CCCTGACAGA GAGTCCGGAA
GGACTGACCG GCACCATCGT CGGTGTTAAT TCACCGGCAA AAATTTTTGG TGAACACGCC
GTTGTCTTTA TCAACCGGGG CAAAAAAGAC GGAATATACA CCGGACAGCG CTATGAGGTT
TATTATCAGG AAAACGAACA GGTAGGTGGG AAAAAAGTGG CCATGCCTCC CATCGTATAC
GGCAGGCTGC TGGTGCTGCT GACCCTTGAT ACCACAGCAA CGGTGGTGGT CACCAATTCC
GACGACATGA TTGAAGCGGG GGCGACTTTT AGAAGTCCTT TATAA
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| Protein sequence | MAENEPAAPS AGDAAAVAPG EPTVQGTGTD PLPPAEDTSV FQETTTGTQL AVEDEQADQP
EGGDFAPGFY YTVRPGDTLW DLSRKFYDSE WVWPAMWGQN KDLTNPHLIY PGQKIRLYQK
TDVPDYRDKM VPPPPPEEEV AVAQFMPEEQ AAPEPPVEKQ VYFEFAPIDS VGFIQRLEKT
VLSRNPLDPY KLGKIFKVEG YDRKLLSQGD TIYIQQTGDT SFISGNTYRI YKPITPVDDP
TTGKYVGHQY NIAGIAEITA VTPDFAVANI HRSFQEITVG DLIMPFEQRA PKIPLTESPE
GLTGTIVGVN SPAKIFGEHA VVFINRGKKD GIYTGQRYEV YYQENEQVGG KKVAMPPIVY
GRLLVLLTLD TTATVVVTNS DDMIEAGATF RSPL
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