| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0517 |
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| Symbol | |
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| ID | 5693339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 583148 |
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| End bp | 583603 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641263101 |
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| Product | tfp pilus assembly protein, major pilin |
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| Protein accession | YP_001528404 |
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| Protein GI | 158520534 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000683927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGAA AAATGAGAGC AAAAGTCACA CTGGGAACCC AGGGCTTCAC CCTGATTGAG
CTGATGATCG TTATCGCCAT CATCGGTATT CTGGCCGCCA TCGCCATTCC CAACTTCATC
GCCTACAGAA ACAAGACCTT CTGTTCGGCC ACTGAATCGG ATGCCAACTC CATTGCATCG
GCGATTGCTG ACTACTTCTC CATTCCGGCC AACGTGTCGG TTACCGACGG CTCTCTTGAG
AGCGACGCCA ACGGCAAGAC CTATGTGGGG ACCGAGCTTT CCAACGGTAA CACCTGGGAT
GTCGACGCCA CCAACATGGA CAATATCGTC ATAGAGGTTA CGGATGTGTC CGGCCGTTGC
CCCGACGATT ATCAGACCGC CATGGACGCC ACCGTCAGCC CCCGGGGTTA CTGGGATGGC
AACAGCCTGT ACGTCAAGAG CATGACCATG GAGTAG
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| Protein sequence | MLRKMRAKVT LGTQGFTLIE LMIVIAIIGI LAAIAIPNFI AYRNKTFCSA TESDANSIAS
AIADYFSIPA NVSVTDGSLE SDANGKTYVG TELSNGNTWD VDATNMDNIV IEVTDVSGRC
PDDYQTAMDA TVSPRGYWDG NSLYVKSMTM E
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