| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0499 |
|---|
| Symbol | |
|---|
| ID | 5693321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 567084 |
|---|
| End bp | 567839 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641263083 |
|---|
| Product | Triose-phosphate isomerase |
|---|
| Protein accession | YP_001528386 |
|---|
| Protein GI | 158520516 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0149] Triosephosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCTC GAACACCGCT GATCGCGGGA AACTGGAAGA TGCACAAGAC CGGCGACGAG
GCCGGGGATA CGGCCGCGGA CCTGGCCCGG CGCATTGCCG GTGTTACCGG GCGGGAGGTA
ATGATCGCCC CGCCCTTTAC GGCCCTGGCC GCTGTAAAAA TCGCCATTGC CGGCAGTATT
ATCGGCCTGG GCGGCCAGAA CCTCCACTGG GAGTCCAGTG GGGCCTTTAC CGGTGAAATT
TCCGGCCCCA TGCTGACGGC CGCGGGCTGC ACCCATGTGA TTATCGGCCA TTCAGAACGC
CGCCAGTTTT TCGGAGAAAC CGATGAAACG GTGAACAAAA AAATTCAGGC GGCCCGGGCG
GCAAACCTGG TGCCGGTGAT GTGCATCGGC GAGACCGAAG CCCAGAGAGA AGCAGAGCAG
ACCTTTTCTG TACTTGACAA ACAGATTCGA AACGGGTTAC AAGGGTTTGC TTTACAGGAT
ATAAGCGACC TGGTGCTTGC CTACGAGCCG GTCTGGGCCA TCGGCACCGG CAAAACCGCG
AGTCGGGAAC AGGCCCAGGA AGCCCACGCG TTTATCCGTT CGGTGGTAGA AAAGCTGTTC
GGCGGCCCGG CAGCGGCGGC CATGCGCATC CTGTACGGCG GCAGCGTCAA GCCGTCCAAC
ATCGCGGACC TGATGGCCAT GGACGACATT GACGGCGCAC TGGTAGGCGG CGCCAGCCTG
GAGGCGGCCA CCTTCGCCGA CATTGTAACG TACTAA
|
|---|
| Protein sequence | MTARTPLIAG NWKMHKTGDE AGDTAADLAR RIAGVTGREV MIAPPFTALA AVKIAIAGSI
IGLGGQNLHW ESSGAFTGEI SGPMLTAAGC THVIIGHSER RQFFGETDET VNKKIQAARA
ANLVPVMCIG ETEAQREAEQ TFSVLDKQIR NGLQGFALQD ISDLVLAYEP VWAIGTGKTA
SREQAQEAHA FIRSVVEKLF GGPAAAAMRI LYGGSVKPSN IADLMAMDDI DGALVGGASL
EAATFADIVT Y
|
|---|
| |