Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0480 |
Symbol | |
ID | 5693301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 543538 |
End bp | 544689 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641263063 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_001528367 |
Protein GI | 158520497 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGTT TAACCTTACT GGGATCCACC GGCTCCATCG GGGTCAACAC CCTGAAGGTG GTGTCGCGGT TTTGCGACCG TTTTTCCGTG GAGGCCCTGT GCGCCCGGGG CAGCGTGGAT ACCCTGGCCG AACAGGTTCA GCGGTTTTCC CCGTCCCTGG CCGTTGTGAT CGACGCGCCC ACGGCTCAGG CGCTTAAGGA ACGGCTGCCG GCCGGGTCGC GCACCGAGGT GCTTTTTGGT GAAGCCGGCT ACTGCCATGC CGTCTCCCTG CCGGGTGTGG ACATGGTGGT GTCGGCCATG GTAGGGGCCG CCGGCCTGGG GCCAACGATT GCCGCCATAA AGGCGGGAAA GGCCGTGGCC CTGGCCAACA AGGAGGTGCT GGTCATGGCC GGTGAAACCG TCATGGCCCT GGCCGCCCAA AAGGGCGTTC CCCTGCTGCC CATCGACAGT GAGCACAGCG CCATCTTTCA GTGCCTTCAG GGAAACGATA AAACGTTTTT ATCAAAGATT CATCTCACCG CTTCGGGCGG GCCGTTTTTA AACAAGACCC GGCAGGAGAT AGAGACTGCC ACGCCGGAAC AGGCCCTTGC CCACCCCACC TGGACCATGG GTAAAAAAAT CTCCATTGAT TCGGCTACGC TGATGAACAA GGGGCTGGAG GTGATCGAGG CCCGGTTTCT GTTTGACGTG CCGGCGGATT GCATCGAGGT GGTGGTCCAT CCCCAGAGCA TTATCCACTC CATGGTCTCC TATATTGACG GCTCCATGAT GGCCCAGCTC TCGGTGCCGG ATATGAAAGG CGCCATTGCC TACGCCCTTT CATATCCGGA GCGGCTGGAT TTAAACCAGC CGGCCCCGGA CCTGGCGGCC CTGGAACAGC TCACCTTTTT TTCCCCGGAC CTGGACCGGT TTCCCTGCCT GGGGCTGGCC TTTGAGGCCT GCCGCCGGAA AAAGACCTTT CCGGCGGTGC TCAACGCGGC CAACGAGGTG GCGGTGGATG CTTTTTTGCG CGAGGCCATC CCTTTTGGCC GGATTCCCCG CGTCATTGAG CAGGTGCTGG CCGAGCACAC AGGGGTGACA GACCCGTCGT TATCTGATAT TAAGGATGCG GACGCGTGGG CCAGGCAAAG GGCCGGCGCC CTTTTACCTT AA
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Protein sequence | MKRLTLLGST GSIGVNTLKV VSRFCDRFSV EALCARGSVD TLAEQVQRFS PSLAVVIDAP TAQALKERLP AGSRTEVLFG EAGYCHAVSL PGVDMVVSAM VGAAGLGPTI AAIKAGKAVA LANKEVLVMA GETVMALAAQ KGVPLLPIDS EHSAIFQCLQ GNDKTFLSKI HLTASGGPFL NKTRQEIETA TPEQALAHPT WTMGKKISID SATLMNKGLE VIEARFLFDV PADCIEVVVH PQSIIHSMVS YIDGSMMAQL SVPDMKGAIA YALSYPERLD LNQPAPDLAA LEQLTFFSPD LDRFPCLGLA FEACRRKKTF PAVLNAANEV AVDAFLREAI PFGRIPRVIE QVLAEHTGVT DPSLSDIKDA DAWARQRAGA LLP
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