Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0470 |
Symbol | rho |
ID | 5693291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 535141 |
End bp | 536385 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641263053 |
Product | transcription termination factor Rho |
Protein accession | YP_001528357 |
Protein GI | 158520487 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000467448 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAT CCGAGCTGAA AAAAAAGAAG ATGGATGAGT TAAAGGAGAT TGCCGCCGGT TACGAGGTCG ACAGCGCCGG CATGAAAAAG CAGGAACTGA TTTTTTCGAT TCTGCAGGCC GAGGCGGAAA ACAACGGGTA TATCTTCGGT GAAAGCACGC TGGAGGTCCT TTCCGACGGG TTCGGTTTTT TACGGTCCCC GGACAGCAGC TATCTGCCGG GGCTGGATGA TATTTACGTG TCGCCTTCCC AGATTCGGCG GTTCAACCTC CGTACCGGCG ACATCGTGTC GGGTCAGATC CGTCAGCCCA AGGAGAATGA GCGCTATTTC GCGCTGCTGA AGGTGGAGGC CATCAACCAC GAAGACCCGG AGATCGCGCG GCACAAAACC CCTTTTGACA ACCTCACCCC TCTGTTCCCC AATGAAAAGA TCAAGCTGGA GCGCGAGTCG GACAACTACT CCATGCGGAT CATGGACCTG CTGACCCCCA TCGGTTTCGG CCAGCGGGGG CTGATCGTGT CGCCGCCCCG GGCCGGCAAG ACCATGCTGC TGCAGAACAT TGCCAACAGC ATCATTGCCA GCCACAAGAA GGTGGTGCCC TTTGTGCTGC TCATCGATGA ACGGCCTGAG GAAGTGACCG ACATGAAGCG TTCCGTTAAC GCTGAAGTGA TCAGCTCCAC GTTTGACGAG CCGGCCGACC GCCATGTGCA GGTGGCGGAA ATGGTCATTG AAAAGGCACG GCGCCTGGTG GAGCATAAAA AGGATGTGGT GATCCTGCTT GACAGCATCA CCCGCCTGGC CCGGGCTTAC AACTCGGTGG TGCCCTCCAG CGGCAAGGTG CTGTCCGGCG GCGTGGATTC CAACGCCCTG CACCGGCCCA AGCGGTTTTT CGGCGCGGCC CGCAATATTG AGGAGGGCGG CAGCCTCACC ATCATGGCCA CGGCCCTGAT CGACACCGGC AGCCGCATGG ATGATGTGAT TTTTGAGGAG TTCAAGGGCA CCGGCAACAT GGAGCTTCAT CTGGACCGGA AGCTGGCCGA TCGGCGCGTC TACCCGGCCA TCGATATCAA CCGGTCCGGC ACCCGTAAAG AGGAACTGCT GGTGGAAAAG GATGTGCTCA ACCGGGTATG GGTGCTGCGC AAGCTGCTGG CGACCCTGAA CTCCGTGGAC GGCATGGAAT TTCTGCTCGA CAAGATGAGC AGCACCAAAA GCAATAAGGA TTTTATGGAT GCCATGAATT CATAG
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Protein sequence | MDISELKKKK MDELKEIAAG YEVDSAGMKK QELIFSILQA EAENNGYIFG ESTLEVLSDG FGFLRSPDSS YLPGLDDIYV SPSQIRRFNL RTGDIVSGQI RQPKENERYF ALLKVEAINH EDPEIARHKT PFDNLTPLFP NEKIKLERES DNYSMRIMDL LTPIGFGQRG LIVSPPRAGK TMLLQNIANS IIASHKKVVP FVLLIDERPE EVTDMKRSVN AEVISSTFDE PADRHVQVAE MVIEKARRLV EHKKDVVILL DSITRLARAY NSVVPSSGKV LSGGVDSNAL HRPKRFFGAA RNIEEGGSLT IMATALIDTG SRMDDVIFEE FKGTGNMELH LDRKLADRRV YPAIDINRSG TRKEELLVEK DVLNRVWVLR KLLATLNSVD GMEFLLDKMS STKSNKDFMD AMNS
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