Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0371 |
Symbol | |
ID | 5693190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 428881 |
End bp | 429621 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641262952 |
Product | hypothetical protein |
Protein accession | YP_001528258 |
Protein GI | 158520388 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00064064 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGGTC ATAATAAATG GTCTTCCATC AAGCACAAAA AGGGCGCTGC GGACGCCAAG CGCGGAAAGG TCTTCACCAA GCTGATCAAG GAGATTACCC TGGCCGCGCG CACGGGCGGT GGCGACCCTG ACGGTAACCC CCGGCTGCGA ACGGCCATTG CCGCGGCAAA AGACGAAAAC ATGCCCAAGG ACAACATCGA GCGGGCCATT AAAAAAGGCA CCGGCGACCT GGAAGGTGTC AACTACGAGG AGAACACTTA CGAGGGCTAC GGTCCGGGCG GGGCCGCCGT GCTGGTGGAG TCCCTGACCG ACAACAAGAA CCGGGCCGTC AGCGAGATCC GTCACATCTT CAGCAAGCAC AACGGCAACA TGGGTGAAAA CGGGTGCGTG GCCTGGATGT TTGATAAAAA GGGATATATC GAGGTGGAAA AAAGCGCGGC CGAGGAGGAC CACCTCATGG AAGTGGCCAT CGAGGCCGGG GCCGAGGATG TGCGGGAGTC CGACGACACC TTTGAGGTGA TCACCGAGGT GGAAGACCTG GAAACGGTGC GCCAGGCACT TGACGGCGCG TCGATCCAAT ACGCCTTTGC CGAGATCACC ATGCTGCCCC AGACCATGGT GGACCTGGAC GACAAAACAT CCGAGCAGAT GATCCGGTTG CTGGATGCCC TGGACGACTG CGAAGACGTG CAGAAGGTTT ACACCAACGC CAGCCTGTCA GACAGCGTGG GCGAGGCGTA A
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Protein sequence | MSGHNKWSSI KHKKGAADAK RGKVFTKLIK EITLAARTGG GDPDGNPRLR TAIAAAKDEN MPKDNIERAI KKGTGDLEGV NYEENTYEGY GPGGAAVLVE SLTDNKNRAV SEIRHIFSKH NGNMGENGCV AWMFDKKGYI EVEKSAAEED HLMEVAIEAG AEDVRESDDT FEVITEVEDL ETVRQALDGA SIQYAFAEIT MLPQTMVDLD DKTSEQMIRL LDALDDCEDV QKVYTNASLS DSVGEA
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