Gene Dole_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0307 
Symbol 
ID5693126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp351770 
End bp352783 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content63% 
IMG OID641262888 
Productelectron transport complex, RnfABCDGE type, D subunit 
Protein accessionYP_001528194 
Protein GI158520324 
COG category[C] Energy production and conversion 
COG ID[COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 
TIGRFAM ID[TIGR01946] electron transport complex, RnfABCDGE type, D subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0928728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAAA ACGCAGACAA GAAAGCAGAA GCCCGGGAGA CCACGGCGGG CCCGGTCCTT 
CAGACGGCCC CGTCTCCCCA TCTGTCCAAC GAGTCTTTCA CCACCCGGCG CATGATGGCC
GATGTGCTTA TCGCCCTGAT TCCGGTGGTG GGCATGGCGG TTTATGTCTT CGGCATGTTT
GCCGTCAAGC AGCTCGTTAT CTGCCTGGTC AGCTGCCTGG CGGCGGAGGC GATCTTCACC
CGCATGCGCA AGCGGCCCAT TCCCCTGGGA GACGGGTCGG CGGCCATCAC CGGCGTGATT
CTGGCCCTGT CCCTGCCCGG ACCGGCGCCC TGGTATGTCG GGGTGATCGC GTCTTTTGTG
GCCATCGGCA TCGGAAAGGT TATTTTCGGG GGCCTGGGCA TGAACATTTT TAACCCGGCC
ATGGTGGGCC GGGCCTTTGT CATGATCGCC TTTGCCGGCG CCATGGCCGC CTCCGGTTAC
ATGACCGCCG GTGGAGCAGT GGACGCCGTA TCCCAGGCCA CGCCCCTGAC CCTGTTTCAG
CAGGAAGGGG TGGTGACCCC GCTGTTTAAG CTGTTTATCG GCACCACCAA CGGCTCTTTG
GGGGAGGGCA GCGCCCTGGC CTGCCTGATC GGCGGCGCCT ACCTGTGCAT TCGCCGCACC
GCCTCCTGGG AGATTCCGGC CGGCGTGATC CTGGCCGTGG TGGTGTGCGC GGTGCTGGTC
AGCCTGGCCA ACCCCGATTC TGAATGGACT GTTCTGCACC ACCTGTTCGG CGGGGCCCTG
CTGTTTGGGG CCTTCTATAT TGCCACCGAC CCGGTGACCA GCCCGCTGAC ATCCGGCGGC
AAGTTTGTCT TCGGCCTGGG GGTCGGCGCC ATCATCATGC TGCTGCGGAT TTTCAGCGGC
TATCCCGAGG GCGTCATGTT TGCGGTACTG CTGATGAACG CCATGACCCC GCTGATCAAC
CGGTGGATGA TTCCCAAGCC TTTTGGAACG GTCAAGGTCG AAGAAGCGGC CTGA
 
Protein sequence
MNENADKKAE ARETTAGPVL QTAPSPHLSN ESFTTRRMMA DVLIALIPVV GMAVYVFGMF 
AVKQLVICLV SCLAAEAIFT RMRKRPIPLG DGSAAITGVI LALSLPGPAP WYVGVIASFV
AIGIGKVIFG GLGMNIFNPA MVGRAFVMIA FAGAMAASGY MTAGGAVDAV SQATPLTLFQ
QEGVVTPLFK LFIGTTNGSL GEGSALACLI GGAYLCIRRT ASWEIPAGVI LAVVVCAVLV
SLANPDSEWT VLHHLFGGAL LFGAFYIATD PVTSPLTSGG KFVFGLGVGA IIMLLRIFSG
YPEGVMFAVL LMNAMTPLIN RWMIPKPFGT VKVEEAA