Gene Dole_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0229 
Symbol 
ID5693046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp252624 
End bp253778 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content62% 
IMG OID641262808 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001528116 
Protein GI158520246 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCTTC ATGTTGACAT GGACGCGTTT TTCGCGTCGG TAGAGCAGCT GGACCACCCC 
GAGTGGCGAG GCCGTGCCGT GGTGGTTGGC AGAAGCTCGG GCCGGGGGGT GGTGGCAGCG
GCCAGCTACG AGGCCCGGGT CTTTGGCGTG CACTCGGCCA TGCCCATGTC CCGGGCCTTA
AAGCTCTGTC CTGACGCGAT TGTGGCGCCC CCGCGCATGG AACGCTACAA GGAGGTGTCT
GCCCGGGTCA TGGAGATCCT GGACGCGGTC TCTCCCCTGG TGGAGCAGGT CTCCATTGAC
GAGGCCTACC TCGACATCTC GGGATGCGAA CGGCTGCACG GCACCCCGGA AACCATTGGA
AAAAATATCA AGAAGCAGGT CTTTGACACG CTCGGCATCA CCTGCTCGGT GGGCGTGGCG
CCGATCAAGT TCCTGGCCAA GATCGCCTCG GACATGAACA AGCCCGACGG CCTGATGGTG
ATTTTGCCCG AAGCGGCGGA CCGGTTTATC GAAACCCTGC CCGTTCACAA GGTGCCGGGG
GTGGGGTCGG TCACAAAAAA ACAGCTGGCC CTGATGGGCA TTGAAACCCT GGGCGACGTG
GTCCGGCTGC CAGACGGAGT GCTTTCCAAA AAGCTGGGAA AATTCGGCCG GCGATTAAAA
GAACTCTCCC GGGGAATCGA CGATTCCCGG GTGGTGCCGT GGCATCCGGC AAAATCGGTG
AGCGAGGAGA CCACCCTTTC CCGGGACACG GCGGAAAAAC AGGAACTGCG GCACCATCTG
CTGCGCCAGG CCGGAGACGT ATGCCGCCAT CTTCAGAAGC TGAACGCCCG GGCCCGGGTG
GTGTTTATCA AGATAAAATA TGCCGACTTT TCCCAAACCA CCCGGCAAAC CACCCTGGAC
GCTCCGGTCC AGTCCTCGGA CACCATTTAC CGGCAGGCGT CCGCCCTCCT GGAAAAACAG
ACCCTTGCCC AGAAGGTCCG GTTGATCGGC GTGGGCGTTA CCGAACTGGT GGTGACCTCC
GGGGGCGTGC AGATGGAGTT ATTTGACGGG GAGGCGCGCC GCGACTCCCG GTGGGAGCAG
GTGGACCGGT CGGTGTCGGC CATATCGGAA AAGTTCGGCA AGACCATGGT CAAGCGGGGC
TCGCTGGATG AGTGA
 
Protein sequence
MILHVDMDAF FASVEQLDHP EWRGRAVVVG RSSGRGVVAA ASYEARVFGV HSAMPMSRAL 
KLCPDAIVAP PRMERYKEVS ARVMEILDAV SPLVEQVSID EAYLDISGCE RLHGTPETIG
KNIKKQVFDT LGITCSVGVA PIKFLAKIAS DMNKPDGLMV ILPEAADRFI ETLPVHKVPG
VGSVTKKQLA LMGIETLGDV VRLPDGVLSK KLGKFGRRLK ELSRGIDDSR VVPWHPAKSV
SEETTLSRDT AEKQELRHHL LRQAGDVCRH LQKLNARARV VFIKIKYADF SQTTRQTTLD
APVQSSDTIY RQASALLEKQ TLAQKVRLIG VGVTELVVTS GGVQMELFDG EARRDSRWEQ
VDRSVSAISE KFGKTMVKRG SLDE