| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0169 |
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| Symbol | |
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| ID | 5692986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 188285 |
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| End bp | 189154 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641262748 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001528056 |
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| Protein GI | 158520186 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAT CAATACTGGT AACCGGCGCG TCAACCGGCA TCGGCTGGGC AACGTCGCTT
GAACTGGCTG AAAAGGGCTG GCGAGTGTTT GCCGCTGTCA GAAAAGAAGC CGACGCCAAA
AAACTGCGGG ACGCCTCCTC CGGCAAAATC ACGACGGTGA TCATGGACAT CGTCGACTAT
GAAAGCGTGA AGCACGGCGC TCAGGAGATC GAAAAGGCCC TTGGCGGGGC CGGCCTGGAC
GCGCTCTTCA ACAACGCGGG GATCTCGGTT CAGGGACCAC TGGAAATAAT ACCCATCGAA
CTGTTTGAAC AGCAGATACG AGTCAACGTT TTTGGTCACG TCTTCGTGAC GCAGACCTTT
CTGCCGCTCC TGCGCAAGGC AAAAGGGAGA ATCGTATTCA CAAGCTCCGA GAGCGGAAGG
ATGACGCTGC CGCTGATGGC GCCCTATTCC GCGTCAAAAT TCGCGCTGGA GGCTGTGGCC
AGCGCTCTGA GGATAGAACT TCGCCCGTGG AAAATCAGGG TCTCTTGTGT GGAATTGCAG
ACCATAAAAA CACCCATGTG GGAGAAGATA GACATCAGCA CCGAGAAAAT GATTGCGTCT
CTCCCGCAGA AGGCCAGGGA CCTTTACCGC AATGAGCTGA AGACCCTGAG CGTTTTTCCT
AAATGGCAGG CGGAAATGGG GATATCCATG AAAAAGGCTG TCAGGGTGAT CATTCGCGCC
CTCAGCGCAA GAAGCCCGAA AGCCCGCTAC CTGGTGGGTT ATGAGGCCCG ATTATTAGTC
TACAGCCACG CAATCACGCC CACCTGGATG ATGGACTGGT TTGCCAGCAA AAGCATGGTA
TTGTTGGGTA AATTTATAAA GCCGAAATGA
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| Protein sequence | MNKSILVTGA STGIGWATSL ELAEKGWRVF AAVRKEADAK KLRDASSGKI TTVIMDIVDY
ESVKHGAQEI EKALGGAGLD ALFNNAGISV QGPLEIIPIE LFEQQIRVNV FGHVFVTQTF
LPLLRKAKGR IVFTSSESGR MTLPLMAPYS ASKFALEAVA SALRIELRPW KIRVSCVELQ
TIKTPMWEKI DISTEKMIAS LPQKARDLYR NELKTLSVFP KWQAEMGISM KKAVRVIIRA
LSARSPKARY LVGYEARLLV YSHAITPTWM MDWFASKSMV LLGKFIKPK
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