Gene Dole_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0140 
Symbol 
ID5692955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp153335 
End bp154450 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content57% 
IMG OID641262717 
Productresponse regulator receiver protein 
Protein accessionYP_001528027 
Protein GI158520157 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCAGC TGTTTACGAT TCTTGTGGTT GACGACAACC TGTTGAACCT GAAGCTTCTG 
TCCACCACCC TGGAAAACCA CGGGTACAAA ACCATCACAG CGGTAGACGG CCCCACGGCC
CGGCAGCTGG CACAGACGGA AAAGCCGGAT ATCATTCTTC TGGATGTAAA AATGCCCGGA
GAAGACGGGT TCGAGGTGAT CCGGCAGCTG AAAAACGACC CGGCAACCGG CGGTATTCCC
GTGCTCTTTC TTTCCGGCGT CATCGAGCTG GAATCCAAGC TCACCGGATT TGAACTCGGC
GCCGTGGATT ATATCACCAA GCCGTTTCAC CCCCTGGAGG TGCTGGCCCG GGTGCGGCTC
CACCTGAAAC TTTCCATTGC CACCAGCTCC CTGATTTCCA ACCAGGCCGA CAAGCTGCGC
CAGATCACCG AGGCCCAGAC CGCCATGCTG ACTACGCCGG ACAATCAACC CGGCGCCGGG
TTCGGGGTTT ATTATTGCGC CCTGGAAGAG GCCGGCGGCG ATTTTTACGA CGTGCTGCCC
ATTTCGGACG ATATTTACGG TTATTTCGTG GCCGACTTTT CCGGCCACGA TATCAAGACC
AGCTATCTGA TCTCATCGGT CAAGGCCCTG CTCAAGCAGA ACTGCACCCC CATTTACCGG
CCCAGTGAAA GCATGAAGCT GATCAATGAT GTGCTGGTGA AGATTCTGCC GGAAGACAAG
TTTCTCACCT CCTGCTACGC CTGCCTGAAC CGGAAGACCA AGAACCTCAC CATCATCAGC
GCCGGCCATC CGCCGGTGGT GTATCTCCCG GCCAAGGGCG AGCCCTCCTT TATTCATCTT
CAGGGTGACG TGATGGGCAG TTTCGAGGAT GTCTCATTCG GCCGGGAGGC CATGAAGGTC
AAGCCAGGGG ACCGTTTCTA CATCTATTCC GACGGCCTGA TCGAGTCGGT CCAGCAGAAG
ATTTCCTGGC CCGAAGGGTC GGAAAAGCTG CTGGCTGCCT GCGCTGCCGT GGCCGACCAG
CCCATTACCA GCGCGCCCCA GCGCATTGCC GAAAAGCTCA AACCCGAGTC TGTTGCGATT
GAGGACGACG TTATCGTGCT GGGTATTCAG GTCTGA
 
Protein sequence
MQQLFTILVV DDNLLNLKLL STTLENHGYK TITAVDGPTA RQLAQTEKPD IILLDVKMPG 
EDGFEVIRQL KNDPATGGIP VLFLSGVIEL ESKLTGFELG AVDYITKPFH PLEVLARVRL
HLKLSIATSS LISNQADKLR QITEAQTAML TTPDNQPGAG FGVYYCALEE AGGDFYDVLP
ISDDIYGYFV ADFSGHDIKT SYLISSVKAL LKQNCTPIYR PSESMKLIND VLVKILPEDK
FLTSCYACLN RKTKNLTIIS AGHPPVVYLP AKGEPSFIHL QGDVMGSFED VSFGREAMKV
KPGDRFYIYS DGLIESVQQK ISWPEGSEKL LAACAAVADQ PITSAPQRIA EKLKPESVAI
EDDVIVLGIQ V