Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0140 |
Symbol | |
ID | 5692955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 153335 |
End bp | 154450 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641262717 |
Product | response regulator receiver protein |
Protein accession | YP_001528027 |
Protein GI | 158520157 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCAGC TGTTTACGAT TCTTGTGGTT GACGACAACC TGTTGAACCT GAAGCTTCTG TCCACCACCC TGGAAAACCA CGGGTACAAA ACCATCACAG CGGTAGACGG CCCCACGGCC CGGCAGCTGG CACAGACGGA AAAGCCGGAT ATCATTCTTC TGGATGTAAA AATGCCCGGA GAAGACGGGT TCGAGGTGAT CCGGCAGCTG AAAAACGACC CGGCAACCGG CGGTATTCCC GTGCTCTTTC TTTCCGGCGT CATCGAGCTG GAATCCAAGC TCACCGGATT TGAACTCGGC GCCGTGGATT ATATCACCAA GCCGTTTCAC CCCCTGGAGG TGCTGGCCCG GGTGCGGCTC CACCTGAAAC TTTCCATTGC CACCAGCTCC CTGATTTCCA ACCAGGCCGA CAAGCTGCGC CAGATCACCG AGGCCCAGAC CGCCATGCTG ACTACGCCGG ACAATCAACC CGGCGCCGGG TTCGGGGTTT ATTATTGCGC CCTGGAAGAG GCCGGCGGCG ATTTTTACGA CGTGCTGCCC ATTTCGGACG ATATTTACGG TTATTTCGTG GCCGACTTTT CCGGCCACGA TATCAAGACC AGCTATCTGA TCTCATCGGT CAAGGCCCTG CTCAAGCAGA ACTGCACCCC CATTTACCGG CCCAGTGAAA GCATGAAGCT GATCAATGAT GTGCTGGTGA AGATTCTGCC GGAAGACAAG TTTCTCACCT CCTGCTACGC CTGCCTGAAC CGGAAGACCA AGAACCTCAC CATCATCAGC GCCGGCCATC CGCCGGTGGT GTATCTCCCG GCCAAGGGCG AGCCCTCCTT TATTCATCTT CAGGGTGACG TGATGGGCAG TTTCGAGGAT GTCTCATTCG GCCGGGAGGC CATGAAGGTC AAGCCAGGGG ACCGTTTCTA CATCTATTCC GACGGCCTGA TCGAGTCGGT CCAGCAGAAG ATTTCCTGGC CCGAAGGGTC GGAAAAGCTG CTGGCTGCCT GCGCTGCCGT GGCCGACCAG CCCATTACCA GCGCGCCCCA GCGCATTGCC GAAAAGCTCA AACCCGAGTC TGTTGCGATT GAGGACGACG TTATCGTGCT GGGTATTCAG GTCTGA
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Protein sequence | MQQLFTILVV DDNLLNLKLL STTLENHGYK TITAVDGPTA RQLAQTEKPD IILLDVKMPG EDGFEVIRQL KNDPATGGIP VLFLSGVIEL ESKLTGFELG AVDYITKPFH PLEVLARVRL HLKLSIATSS LISNQADKLR QITEAQTAML TTPDNQPGAG FGVYYCALEE AGGDFYDVLP ISDDIYGYFV ADFSGHDIKT SYLISSVKAL LKQNCTPIYR PSESMKLIND VLVKILPEDK FLTSCYACLN RKTKNLTIIS AGHPPVVYLP AKGEPSFIHL QGDVMGSFED VSFGREAMKV KPGDRFYIYS DGLIESVQQK ISWPEGSEKL LAACAAVADQ PITSAPQRIA EKLKPESVAI EDDVIVLGIQ V
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