Gene Dole_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0123 
Symbol 
ID5692938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp137939 
End bp138916 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content39% 
IMG OID641262700 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001528010 
Protein GI158520140 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAC GGATTAACGA TGTACTGACC CTTCTCGACA ACAAATCGTA TTTGCGGACG 
TTCTTTTTTA GATTTTTTGC AATGACAACC ATGGATTATA TAAAATTTGT ATATTGGTCT
GCGGAAAAAT CCAGAACCCC TGTAATCGGA AGACTTTTTA AATTTATGAG CGAATCCTAT
TACAAAAACG TTCATACCAG TGCAATCAAA CTCCCGCTTA AGGATATTGA AGATGTGATT
TTGAATTGTG ATCATGTATC TGTGGGGCCA TGCCCCTGCA GGATTATTTT CGATGATGGC
ACATGTAAGG CGCCTGTGTA TACCTGTATT AAAATTAATT ACTTTTCGAA AATGACAACA
AAACTCGAAA AAATTGCTTC CCATCTCCGA AAAAAAAGGG GCATGCGGGT CGGCAATAAA
CACAGCAAGG AACTTACAAA GGACGAAGCG CTCGAAATTG TGCGCAATTC GAGAAAACAT
GACCTGATTT TCTCACTTGA GTCATGCATT CAACCATATC AGAATAATAT ATGCGCATGC
TGCACCGACT GTTGTATTGA ACTGAATGGA CGTTATAAGT TTGGTCTCGA TGTTTCTCCA
AAGGGGCCAT ATATGCCGGT TGTAAAAAAA GAGGCCTGCA AAAAATGCAT GGACTGTGTG
AACCGGTGTC CTGTGAAAGC GATATCACAT CAGGAAGATA CTATCACTAT AGATATGGGA
CTTTGTCTGG GTTGTGGGAT CTGCACTGAA AAATGTCCCC ATGAAGCAAT GGAGCTTGTT
GTTGACACCG AGTATATCCC CTCCTATGTT CAGCCGGGAT TCTTTAAAAT GATCTATATA
TGCTGCCTCA CCATGACCGT GTTTTTCTTT TTCATTTATT ACAAATTGAC AAGAAAGAGC
ATTAATTTCA TGTATTCAAA AGCAGAACCA AGAGAAAGCG ATTTAATACA GGCGGACAGT
AACATTAAAA CTAATTAG
 
Protein sequence
MEKRINDVLT LLDNKSYLRT FFFRFFAMTT MDYIKFVYWS AEKSRTPVIG RLFKFMSESY 
YKNVHTSAIK LPLKDIEDVI LNCDHVSVGP CPCRIIFDDG TCKAPVYTCI KINYFSKMTT
KLEKIASHLR KKRGMRVGNK HSKELTKDEA LEIVRNSRKH DLIFSLESCI QPYQNNICAC
CTDCCIELNG RYKFGLDVSP KGPYMPVVKK EACKKCMDCV NRCPVKAISH QEDTITIDMG
LCLGCGICTE KCPHEAMELV VDTEYIPSYV QPGFFKMIYI CCLTMTVFFF FIYYKLTRKS
INFMYSKAEP RESDLIQADS NIKTN