| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0121 |
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| Symbol | |
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| ID | 5692936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 132858 |
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| End bp | 136085 |
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| Gene Length | 3228 bp |
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| Protein Length | 1075 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641262698 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001528008 |
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| Protein GI | 158520138 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAC GGACCGACAT AGAAAAAATT CTGATCATCG GGGCCGGCCC CATCATCATC
AGCCAGGCCT GCGAGTTTGA CTACTCCGGC ACCCAGGCGT GCAAGGCGTT AAAGGAAGAG
GGCTATTCCG TGGTGCTGGT CAACAGCAAC CCGGCCACCA TCATGACCGA CCCCGAGTTT
GCCGACGCCA CCTACATTGA GCCGGTGACG CCCGAGGCCG TGGCCGCCAT CATCGAAAAG
GAGCGGCCCT GCGCCATTCT GCCCACCCTG GGGGGCCAGA CCGGCCTGAA CACGGCCGTG
GCAGTTGCCG AGATGGGGGT GCTGGAAAAG TTTAACGTGG AGATGATCGG GGCGTCGCTT
TCCGCCATCA AAAAGGCCGA GGACCGGGAC CTGTTCCGAA AGGCCATGAA CAACATCGGC
CTGCGCATTC CCAGAAGCGG CATTGCCACC AGCATGGACC AGGTGCGGGC CATTGCCGAT
GAGATCGGTC TGCCCCTGAT CGTGCGGCCC AGCTTTACCC TGGGCGGCAC CGGCGGCGGC
GTGGCCCACA CGCAGGCCGA GCTGGACGCC CTGTCCGCCG GCGGCCTGGA GGCCAGCCTC
ATAAACCAGG TGATGATCGA AGAGTCGGTG GTGGGCTGGA AAGAGTACGA GCTGGAGGTG
ATGCGGGACC GGGCGGACAA CGTGGTGATC ATCTGTTCCA TTGAGAACCT TGACCCCATG
GGGGTCCACA CCGGGGAAAG CATCACCGTG GCCCCGATCC AGACCCTTTC CGACAAAGAG
TACCAGGTCA TGCGGGACGC CTCCATTGCC ATCATGCGGG AGATCGGGGT GGACACCGGC
GGCTCCAATG TCCAGTTTGC CGTCAACCCG GCCAACGGCG AGATGGTGGT GGTGGAGATG
AACCCCAGGG TGTCGCGCAG CTCGGCCCTG GCCTCCAAGG CCACGGGCTT TCCCATTGCC
AAGATCGCGG CCAAGCTGGC CGTGGGCTAT ACCCTGGACG AAATCGCCAA CGACATCACC
GGCGAAACAC GGGCCGCGTT TGAGCCGACC CTGGACTACT GCGTGGTCAA GATTCCGCGC
TGGACCTTTG AAAAGTTTCC GGAAACAAAA GACGAGCTCT CCACCTCCAT GAAGTCCGTG
GGCGAAACCA TGGCCATCGG CCGGACTTTT AAAGAGGCGT TGCAGAAGGG CATCCGGTCC
CTTGAGATCT CCCGGTTCGG CCTGGGGGCC GACGGCGCGG ATAAAATCGA CCCGTCGATC
CAGGAGATCA CGGACAAACT GGCCACACCC AACTCCGAGC GGCTGTTCTA CCTTCGGTAT
GCCCTTCAGA AGGGTTTTAC CATTGACGAC ATTTACCGGC TCACCCGCAT CGACCCCTGG
TTTTTAGACC AGATCGAAAA GATACTTTTT GTTGAAAAAA CACTGATCGA GCATAAAGAC
AACCTTTCCG CCGACCTTTT GTGGCGTGCC AAGCGGGAGG GTTTTTCCGA TGTTCAGCTG
GCCCATATCA CGGGAAAGAC CGAAGAGGAG ATTCGCGCGC TCCGTTACGA AGCGGGCCTG
CGGCCGGTCT ACAAGCTGGT GGACACCTGC GCCGCGGAGT TCAAGGCGGC CACGCCGTAT
TACTACTCCA CCTACGAGAC GGAAAACGAG GCCCGGGTGT CGGACCGCAA AAAGGTGGTG
ATCCTGGGCG GGGGTCCCAA CCGCATCGGC CAGGGCATTG AATTTGACTA CTGCTGCGTG
CACGCCTCCT TTGCCCTGCG CGAAGAGGGG GTGGAGAGCA TCATGGTCAA CAGCAACCCC
GAGACCGTGA GCACCGACTA TGACACCTCG GACAAGCTCT ATTTCGAGCC CCTTACCGTG
GAGGATGTGC TCCACATCAT TGACACGGAA AAGTGCGACG GCGTGATCGT CCAGTTCGGG
GGCCAGACCC CGCTTAATAT CGCCGAGGCC CTTGCCCGTG CCGGGGCCCC CATTATCGGC
ACCTCGCCTG AATCCATTCG CCGCAGCGAG GACAGAAAGT TTTTCGCCGC CATGCTCAGC
AAGCTGGGCC TGCTTCAGCC GCCCAACGGC ACGGCGGTCA ACGTGGAAGA GGCCGCGGCC
ATTGCCCAAA ACCTGGGATA CCCGGTGATC GTGCGGCCGT CGTTTGTGCT GGGGGGCCGG
GCCATGAAGA TCGTCTACAC CCCGGCGGAG CTGGCCAACT TTGCCCGCCA CGCCATCAAG
GCCTCGCCCA AACATCCCAT CCTGGTGGAC AAGTTTTTAG AAGACGCCAT TGAGCTGGAC
GTGGACGCCA TTTCCGACAC CACCGGCCAT ACCGTGATCG GCGGCATCAT GGAGCATATC
GAGGAGGCGG GCATTCACTC CGGCGACTCG GCCTGCGTGC TGCCGCCCCA CAGCGTCAAG
CCCCATGTGA TCGACGAGAT CATTCGGGCC ACCAAGGCCA TGGCCGCTGA ACTGAAAGTG
GTGGGCCTGA TGAACGTGCA GTACGCGGTC AAGGGCGACA CCCTTTACGT GATCGAGGTC
AACCCCCGGG CCTCCCGCAC CGTGCCCTTT GTCAGCAAGG CCACCGGCGT TGCCCTGGCC
AAGGCCGCCA CAAAAGTGAT GCTGGGCCGG ACGTTAAAGG AGCTGGGCAT TGTGGACGAC
GCCTGGCGAA CCGCGCATAT CGCGGTCAAG GAGGCGGTGT TTCCCTTTAA CCGGTTCCCC
GACGTGGACA CCCTGCTGGG CCCGGAGATG AAGTCCACCG GCGAGGTCAT GGGCCTGGAT
ATGGATTTCG GCGCCGCCTT TGCCAAGGCC CAGCTGGGGG CCGGCCAGAA ACTGCCGGTC
AAAGGAAACG TTTTTATCAG CGTTCAGGAC AAAGACAAGC GGGCCACGGC CGGCATTGCC
CGGCAGTTGA GCGACGCCGG GTTTGAGATC GTGGCCACCG CCGGTACGGC GGCGTTTTTA
AAAGAGCAGC GCATTGCCGT CCGGCCCATC AACAAGGTGT CTGATGGCCA CCCCCACGTG
GTGGACGCCA TTGTCAACGG AGAGATTCAA CTGGTGATCA ACACCGGCAC GGGCCAGGAC
TCCCAGGTGA AGCGGGACGG GTACATGATC CGGCGCACCA CGCTGCGGTG CCAGGTGCCC
TATGCCACCA CCCTGCCCGG TGCCCTGGCC GTGTGCCGCG GCATTCTCCA GCTCAAGAAA
CAGGCCCTGG GTGTAAAATC GATTCAGGAG TATCATCAAA AGCCATGA
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| Protein sequence | MPKRTDIEKI LIIGAGPIII SQACEFDYSG TQACKALKEE GYSVVLVNSN PATIMTDPEF
ADATYIEPVT PEAVAAIIEK ERPCAILPTL GGQTGLNTAV AVAEMGVLEK FNVEMIGASL
SAIKKAEDRD LFRKAMNNIG LRIPRSGIAT SMDQVRAIAD EIGLPLIVRP SFTLGGTGGG
VAHTQAELDA LSAGGLEASL INQVMIEESV VGWKEYELEV MRDRADNVVI ICSIENLDPM
GVHTGESITV APIQTLSDKE YQVMRDASIA IMREIGVDTG GSNVQFAVNP ANGEMVVVEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDEIANDIT GETRAAFEPT LDYCVVKIPR
WTFEKFPETK DELSTSMKSV GETMAIGRTF KEALQKGIRS LEISRFGLGA DGADKIDPSI
QEITDKLATP NSERLFYLRY ALQKGFTIDD IYRLTRIDPW FLDQIEKILF VEKTLIEHKD
NLSADLLWRA KREGFSDVQL AHITGKTEEE IRALRYEAGL RPVYKLVDTC AAEFKAATPY
YYSTYETENE ARVSDRKKVV ILGGGPNRIG QGIEFDYCCV HASFALREEG VESIMVNSNP
ETVSTDYDTS DKLYFEPLTV EDVLHIIDTE KCDGVIVQFG GQTPLNIAEA LARAGAPIIG
TSPESIRRSE DRKFFAAMLS KLGLLQPPNG TAVNVEEAAA IAQNLGYPVI VRPSFVLGGR
AMKIVYTPAE LANFARHAIK ASPKHPILVD KFLEDAIELD VDAISDTTGH TVIGGIMEHI
EEAGIHSGDS ACVLPPHSVK PHVIDEIIRA TKAMAAELKV VGLMNVQYAV KGDTLYVIEV
NPRASRTVPF VSKATGVALA KAATKVMLGR TLKELGIVDD AWRTAHIAVK EAVFPFNRFP
DVDTLLGPEM KSTGEVMGLD MDFGAAFAKA QLGAGQKLPV KGNVFISVQD KDKRATAGIA
RQLSDAGFEI VATAGTAAFL KEQRIAVRPI NKVSDGHPHV VDAIVNGEIQ LVINTGTGQD
SQVKRDGYMI RRTTLRCQVP YATTLPGALA VCRGILQLKK QALGVKSIQE YHQKP
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