Gene Dole_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0109 
Symbol 
ID5692924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp120309 
End bp121034 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content57% 
IMG OID641262686 
Producthypothetical protein 
Protein accessionYP_001527996 
Protein GI158520126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT TTGGTTTTGT TCTTGGTGTG TTGGGTCTGT TATTGGGGGT CGGTGTCAGC 
AGCGCGACGG CCGCGGCCGT GTCAGCCGGC GCGGATGTTG TGTCCGCCTA TGTATGGCGG 
GGCATTACCT TCAATGACGA GGCGGTGGTC CAGCCCTATC TGGACGTCAC CGCGGAAAAC 
GGTATTAACC TGAACGTATG GGGCAACTAC GACGTGGGTG ATTATGGGGG AACCCTGGCG 
GAAGATAACG AGTTTTCCGA AATCGACCTG ACGCTTTCCT ACGGATTTTC CCTGGATCCC 
GTGGATATTA CCGTGGGCCA CATCGAATAC CTGTTTCCCA ATGGCGGGGG CCAGGGGACC 
AGTGAGCTGT TTATCAGCAC CTGGGCGTCC CTGGTGGCAG GACTGTCCGC GGGTGTCGAT 
TTTTATTATG ACTATGACGA ACTGGATGAA TACTACCTGT CGGCGGGCAT TGCCTACGAC 
CTGGAGCTTC CCCGGGGCAT CGGCCTTGGA TTTGGCGCGT CGGCCGGGTA CGCAGGAAAC 
CGCTATGCCG CGGATGGAAA CCACGACTTT TACGACTACA ACCTCTCCCT GTCCGCGGGG 
TTTCCGGTAA CCGACTCCGT CGACCTGTCC GCATTTATTG CCTACACGGA CACCTTTGAC 
AACACCACCC TGCCCGACCA GGATGTCGAC GTTTATGGCG GCGCCGGGTT CTGCGTGAAT 
TTCTAA
 
Protein sequence
MKRFGFVLGV LGLLLGVGVS SATAAAVSAG ADVVSAYVWR GITFNDEAVV QPYLDVTAEN 
GINLNVWGNY DVGDYGGTLA EDNEFSEIDL TLSYGFSLDP VDITVGHIEY LFPNGGGQGT 
SELFISTWAS LVAGLSAGVD FYYDYDELDE YYLSAGIAYD LELPRGIGLG FGASAGYAGN 
RYAADGNHDF YDYNLSLSAG FPVTDSVDLS AFIAYTDTFD NTTLPDQDVD VYGGAGFCVN 
F