Gene Dole_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0088 
Symbol 
ID5692903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp96616 
End bp97617 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content61% 
IMG OID641262665 
ProductGTP-binding protein Obg/CgtA 
Protein accessionYP_001527975 
Protein GI158520105 
COG category[R] General function prediction only 
COG ID[COG0536] Predicted GTPase 
TIGRFAM ID[TIGR02729] Obg family GTPase CgtA
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00208899 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATTCA TTGACGAAGC CACGATCACG GTCAGCTCCG GCAAGGGCGG CCGGGGATGT 
GTCAGTTTCC GACGGGAACG ATTCGTCCCC CGGGGCGGCC CGGACGGCGG AGACGGCGGC
AGTGGCGGCA GCCTTCTCTT TCGCGTAAAT CCCTCCAAAC GCACCCTTTA CGCCTTTCGT
TCCAAAAAAC AGTTTGCCGC GCCCAACGGC GCGCCCGGCG AAGGCCGGCA GAAAACCGGC
AAGTCCGGCG ACGATCTTGT CATTGAGGTG CCGCCGGGAA CCCTTATCTT TGACGCTGAC
ACCGGCGCAA TTATTCGGGA CATGGTTTCC CCGGAAGAAG ACTTTGTGTT TCTGACCGGG
GGCCGGGGCG GCAAAGGCAA CAAACATTTT GCCACATCCA CCCACCAGAC CCCCCGGTTT
GCCCAGCCCG GAGAACCGGC CCAGACCGCC ACGGTAAGGC TGGAGCTCAA ACTGCTGGCC
GACGTGGGCC TCATCGGTCT GCCCAATGCC GGCAAATCCA CCCTGCTCTC CGTAATCTCC
GCGGCCCGGC CGGCCATCGG CGCCTATCCC TTTACCACCC TTTCCCCCAA CCTGGGCATG
GTAACCCTTG CCGGTGCCGA GCCTTTTGCC GTGGCTGATA TTCCCGGCCT GATCGAAGGG
GCCCACACCG GGGCCGGCCT GGGCATCCGC TTTTTAAAAC ACATTGAGCG CACACGGCTG
CTGGTTCACC TGATCGACGC CTCCGCCATC GACCCGGCGG ATCCGGTTGC CCCCTTTCGG
ATCATCAACG CGGAACTGGC CATGTTCAGC CCGGCCCTGG CCGAAAGGCC ACAGGTGGTG
GTGTTAAACA AGATGGACCT TACCGGCGCC GAAGCGCTGG CCCAACAGTT TATCAACGCT
GCCGGCATTA AAAAATGCTT TCTGATTTCC GCGGCCACCC GGTCCGGGGT GGAGGAGTTG
AAAAAACATC TGTTTGAGTT ATTATGCAGC CATGACACCT GA
 
Protein sequence
MKFIDEATIT VSSGKGGRGC VSFRRERFVP RGGPDGGDGG SGGSLLFRVN PSKRTLYAFR 
SKKQFAAPNG APGEGRQKTG KSGDDLVIEV PPGTLIFDAD TGAIIRDMVS PEEDFVFLTG
GRGGKGNKHF ATSTHQTPRF AQPGEPAQTA TVRLELKLLA DVGLIGLPNA GKSTLLSVIS
AARPAIGAYP FTTLSPNLGM VTLAGAEPFA VADIPGLIEG AHTGAGLGIR FLKHIERTRL
LVHLIDASAI DPADPVAPFR IINAELAMFS PALAERPQVV VLNKMDLTGA EALAQQFINA
AGIKKCFLIS AATRSGVEEL KKHLFELLCS HDT