Gene Dole_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0086 
SymbolrplU 
ID5692901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp95992 
End bp96306 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content53% 
IMG OID641262663 
Product50S ribosomal protein L21 
Protein accessionYP_001527973 
Protein GI158520103 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.09341e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGCTG TAATTGCTAC CGGTGGAAAA CAGTACCGGG TCGAAAAAGA CGAGGTGTTG 
AGGCTTGAAA AGCTTCCCGG TCAGGTGGGG GACACGGTCT CCTTTGACCA GATTCTGCTG
TTTTCAGACG GCGAATCCGT TTCCGTGGGA ACCCCTGTTC TGGGCAATGT CACTGTCTCC
GGTAAAATCG TGGAGCAGGA CAGGGCCAAA AAAATCCTGG TCTTTAAAAC CAAGCGACGG
AAACGGTATC GTCGCAAGCA GGGTCACCGC CAGTCGTTTA CCGCCGTCCG GATCGAAACC
ATTCAGGCGG GATAA
 
Protein sequence
MYAVIATGGK QYRVEKDEVL RLEKLPGQVG DTVSFDQILL FSDGESVSVG TPVLGNVTVS 
GKIVEQDRAK KILVFKTKRR KRYRRKQGHR QSFTAVRIET IQAG