Gene Dole_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0084 
Symbol 
ID5692899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp94358 
End bp95512 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content63% 
IMG OID641262661 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_001527971 
Protein GI158520101 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.2368e-07 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCAGT TTGAAACCAC GACCGCCTGT CCCGACACAA AGGCCCGTAC CGGAAAAATG 
ACAACCGCCC ACGGCGACGT GGCCACCCCG GTGTTTATGC CGGTGGGCAC CCTGGCCACG
GTCAAATCGC TGTCGCCCGA AGATCTTGTC GCCTGCGGGG CCCAGATCAT TCTGGGCAAC
ACCTATCACC TCTACCTGCG GCCGGGGTGC GACATCATTG ACGCCTTTTC CGGGGTCCAT
GCCTTTATGG GCTGGAACCG GCCCCTTCTC ACGGACAGCG GTGGGTTTCA GGTCTTTTCC
CTGGCCAAGC TCTCCCGCAT CACCGAAGAG GGGGCCGCGT TTCAGTCCCA TCTGGACGGC
TCCAGCCACC TGCTGACACC CGAGTCGGTG ATCGACATTC AAAACCGGCT GGGTTCCGAC
ATTCAGATGT GCCTGGACCA GTGCATCGCC TTTCCGGCCG AAAAAGGGGC GGCCCGGGAC
GCGGCAAACC TTACCACCCG GTGGGCCGGC CGGTGCCGGA ACCGGTGGCA AGAGACCGGC
GGTCCGTCCC GGTGCGGGCT GTTCGGCATT GTCCAGGGCG GCATGTTTGA CGACCTGCGC
GCCGATTCGG CCGGCCGTCT GGTGGACCTG GACTTTTCCG GGTATGCGGT AGGCGGCCTG
AGCGTGGGCG AACCGATAGA GACGCGGCTG GCCGTGGCCG AACACACCCT GTCCCTGCTG
CCGCCGGACA GGCCCCGCTA TATCATGGGC GTGGGTACGC CGGCGGAGCT GGTGGAGCTG
GTGGCCCTGG GCGCAGACAT GTTCGACTGC GTCATGCCCA CCCGGAACGC CAGAAACGGC
AAACTTTTTA CCAGCTTCGG CGCCATCAAC ATCCGCAATG CCTGCCACGC GAAAGAGACC
GGGCCCGTGG ATCCGGCATG CACCTGTTAC ACCTGCACCC GCTTTTCCCG GGCCTATCTC
CGACACCTGT TCATGTCCCG GGAGCTGCTG GCCTATCGCC TTGCAACTCT TCACAATCTC
TTCTATTATA TAAACCTGAT AAACGACGCA CGCGCCGCAG TGGCTGCCGG CCGGTTTGCC
GCCTTTCGAA AGGCCTTTTA CGCCGCGCAG CAGGCGACAG GCCCCACGGG AAAAGAGCCC
TGCGCCGGCT CTTGA
 
Protein sequence
MFQFETTTAC PDTKARTGKM TTAHGDVATP VFMPVGTLAT VKSLSPEDLV ACGAQIILGN 
TYHLYLRPGC DIIDAFSGVH AFMGWNRPLL TDSGGFQVFS LAKLSRITEE GAAFQSHLDG
SSHLLTPESV IDIQNRLGSD IQMCLDQCIA FPAEKGAARD AANLTTRWAG RCRNRWQETG
GPSRCGLFGI VQGGMFDDLR ADSAGRLVDL DFSGYAVGGL SVGEPIETRL AVAEHTLSLL
PPDRPRYIMG VGTPAELVEL VALGADMFDC VMPTRNARNG KLFTSFGAIN IRNACHAKET
GPVDPACTCY TCTRFSRAYL RHLFMSRELL AYRLATLHNL FYYINLINDA RAAVAAGRFA
AFRKAFYAAQ QATGPTGKEP CAGS