| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0079 |
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| Symbol | |
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| ID | 5692894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 88777 |
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| End bp | 90897 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641262656 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001527966 |
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| Protein GI | 158520096 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.373309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACA CGGAAAAATG GAAACAGATG GCGGAAAAAG AGATGAAGGG CAAGCCGGTC
GATTCCCTGT TATGGAAAAC ACCGGAAGGC GTCACCATCA AGCCCCTTTA CACAAAAGAG
GACGCGGAAA ACCTGTCCCA CGTGGACACA CTTCCCGGAG AGACCCCCTT TGTGCGGGGG
GTCAAGGCCA CCATGTACGC GGGACGGCCC TGGACCATTC GCCAGTACGC CGGTTTTTCA
ACCGCCAAAG AGTCCAACGC CTTTTACCGC AGGAACCTGG CCGCCGGCCA GAAGGGGCTT
TCCGTGGCCT TTGACCTGGC CACCCACCGG GGCTACGATT CGGATCATCC CCGGGTGGCG
GGGGACGTGG GCAAGGCCGG TGTGGCCATT GACTCGATCG AGGACATGAA GATTCTGTTT
GACGGCATTC CCCTGGATAA GATGTCCGTC TCCATGACCA TGAACGGCGC GGTCCTGCCG
GTGCTGGCCG CCTATATCGT GGCCGCCGAG GAGCAGGGCG TGGACCAGAA ACTGCTGGCC
GGCACCATTC AGAACGACAT ATTAAAGGAA TATCTCACCC GCAACACATA CATCTATCCG
CCGACGCCTT CCATGCGTAT CGTGTCGGAC ATCATTCAAT ACTGTTCGAC CCACATGCCC
AGATACAACA CCATCAGCAT CAGTGGTTAC CACATGATGG AGGCCGGCGC CGATTCGGTG
CTTCAGACCG CCTTTACCCT GGCCGACGGC CTGGAGTACA TCAAGGCGGC CCTGGCCGCG
GGCCTGGATA TCGATGCCTT CGCTCCCCGG CTCTCCTTTT TCTTCGGCAT CGGCATGAAC
TTTTTCATGG AGATTGCCAT GCTCCGGGCG GCCCGGCTGC TCTGGTCAGA AATTGTGGGC
CGGTTTTCCC CCAAGGATTC CCGGTCTTCC ATGCTGCGCA CTCACTGCCA GACCTCGGGC
TGGAGCCTGA CCCAGCAGGA TCCCTACAAC AACATCATTC GCACCACCCT GGAGTGTCTT
TCCGCGGTGC TCGGCGGCAC CCAGTCCCTG CACACCAACG CCTTTGACGA GGCCGTGAGC
CTGCCCACCG AGCTGTCGGC CCGAGTGGCC AGAAACACCC AGATTATCGT TCAGGAGGAG
AGCCATGTCT GCAAGGTGGT GGATCCCCTG GGCGGTTCCT ACTACGTGGA AGCCCTGACC
GCGGCCATTG CGGACGAGGC CCGCAAGATC ATCGCGGAAA TCGAGGAGAT GGGCGGCATG
GCCAAAGCCA TTGAAACCGG CATGCCCAAA ATGCGCATCG AAGAGGCGGC GGCCCGGCGC
CAGGCCCGCA TTGACCAGGG AAAAGAGACC GTGGTGGGCG TCAATAAATA CAAGGTGGCT
GACGAAAGCC CCCTGGAGGT GCGGGAGGTT TCCGAAGCGG TGCGGGAGGA GCAGGAGGCC
CGGCTTAAAG AATTGCGGGC GTCGCGGGAC AACGAGGCCG TTAAAAAGGC CCTTGAGGCG
GTCACCCAAT GCGCCGGGTC CGGCGGCAAC CTTCTGGAGG CCTGTATTCC CGCGATTCGG
GCCCGGGCCA CGGTGGGAGA GATCTCCGAC GCCATGGAAA AGGTGTTTGG CCGGTTTGTG
GCCACCACCC AGTGCATCTC CGGCGTCTAT GCCGGCGAGT ACGGCGACAG CGAGGTGATT
GCCTCCCTGC GAAAACGGAC CGACCAGTTT GCCGAAAAGC ACGGCCGCAA ACCCAGAATC
CTGGTGGTCA AGATGGGCCA GGACGGACAC GACCGGGGCA TCAAGGTGGT GGCCACCGGG
TTTGCCGACC TGGGGTTTGA CGTGGACATC GGCCCCATGT TCCAGACGCC GGAAGAGGCG
GCCAAAATGG CGGTGGAAAA CGACGTGCAC GTGGTGGGGG TCTCCAGCCT GGCGGCGGGC
CACAAGGCCC TGGTGCCCCA GCTGATCGCG GCCCTCAAGG CCGAAGGTGG TGATGATATT
CACGTGGTGG CCGGGGGCAT CATTCCGCCG GCGGATTACG ACGTTCTCCG CTCCGCCGGC
GTGGCCGCGG TGTTCGGTCC GGGTACGGTG ATCACCGACT CGGCCAACCA GGTGCTGAAG
GTGCTGGAAG CCGCAGGGTA A
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| Protein sequence | MANTEKWKQM AEKEMKGKPV DSLLWKTPEG VTIKPLYTKE DAENLSHVDT LPGETPFVRG
VKATMYAGRP WTIRQYAGFS TAKESNAFYR RNLAAGQKGL SVAFDLATHR GYDSDHPRVA
GDVGKAGVAI DSIEDMKILF DGIPLDKMSV SMTMNGAVLP VLAAYIVAAE EQGVDQKLLA
GTIQNDILKE YLTRNTYIYP PTPSMRIVSD IIQYCSTHMP RYNTISISGY HMMEAGADSV
LQTAFTLADG LEYIKAALAA GLDIDAFAPR LSFFFGIGMN FFMEIAMLRA ARLLWSEIVG
RFSPKDSRSS MLRTHCQTSG WSLTQQDPYN NIIRTTLECL SAVLGGTQSL HTNAFDEAVS
LPTELSARVA RNTQIIVQEE SHVCKVVDPL GGSYYVEALT AAIADEARKI IAEIEEMGGM
AKAIETGMPK MRIEEAAARR QARIDQGKET VVGVNKYKVA DESPLEVREV SEAVREEQEA
RLKELRASRD NEAVKKALEA VTQCAGSGGN LLEACIPAIR ARATVGEISD AMEKVFGRFV
ATTQCISGVY AGEYGDSEVI ASLRKRTDQF AEKHGRKPRI LVVKMGQDGH DRGIKVVATG
FADLGFDVDI GPMFQTPEEA AKMAVENDVH VVGVSSLAAG HKALVPQLIA ALKAEGGDDI
HVVAGGIIPP ADYDVLRSAG VAAVFGPGTV ITDSANQVLK VLEAAG
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