Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0074 |
Symbol | sucC |
ID | 5692889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 82431 |
End bp | 83597 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641262651 |
Product | succinyl-CoA synthetase subunit beta |
Protein accession | YP_001527961 |
Protein GI | 158520091 |
COG category | [C] Energy production and conversion |
COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.698704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGATAC ACGAATTTCA GACAAAAGAG CTGTTTCGGA CATATGGCAT TCCCACGCCC GAAGGCCGTA TGGTGAACAC GGCGGAAGCG GCGGGAGAGG CAGCCGGAGA ACTGGGGGGC TTTCCCGTTG TGGTCAAGGC CCAGATTCAC GCCGGGGGTC GCGGAAAAGG CGGTGGCGTC AAGCTGGCCA AATCCGCTGA TGAAGCCAAA TCCCTGGCCG GCGCCATGCT GGGCTCCCGG CTGGTGACCC CCCAGACCGG GCCGGAAGGC ACCCTGGTGC AGAAGGTGCT GGTGGAACAG GGGGTGAGCA TTGCAAAAGA GCTTTACCTC TCCGTGGTGG CCGACCGGGA AACAGCCGGC ATCGTAATCA TGGCCAGTGA GGCCGGGGGC ATGGACATCG AGGCCGTGGC CGAGACCACG CCGGAAAAGA TCCTCAAGGT CTTTGTCAAC CCCCTGGCCG GCCTGTCGGC CTTTCACTGC CGCCAGGCCG CATATGGCCT CAACCTGCCG GCCGAGGCGA TCAAACCGTT TACTCAGGTG GTGTCCGGCC TGTTTAAGCT TTTTGTGGAT TATGATGCCT CCCTGGTGGA GATCAACCCC CTGATTCTTA CCACGGACAA GGCGGTGATG GCCCTGGACG CCAAAATCAA CTTTGACGAC AGCGCATTGT TCCGGCACAA GGATATTCTG GCCCTGAGGG ACACTGACGA AGAAGATCCC CTTGAGGTAG AGGCCTCCAG GTTTAACCTG AACTACATCA ACATGGACGG CAATGTTGGT AACATGGTCA ACGGCGCCGG CCTGGCCATG GCCACCATGG ACATTATCAA GCTGGCTGGT GCCGAACCGG CCAACTTCCT GGATGTGGGC GGCGGCGCCA ATGCCGAGAT GGTGGAAAAC GGGTTTCGCA TCATTTTAAG CGACCCCAAG GTCAAGTGCA TTCTGGTCAA CATCTTCGGC GGCATTCTGC GCTGTGATGT GCTGGCCAGC GGCATTGTCC AGGCGGCCAG AAACACGGCC ATTCATGTGC CCCTGGTGGT TCGCATGGAG GGCACCAACG TGGACGAGGG TAAGCGGATC CTGGCCGAGT CGGGCCTGGA CCTGCATTCA GCGGCCAGCC TCAAGGATGC GGCGGCCAGG GTGGCCCAGG TTGTGGCAGC AGCCTGA
|
Protein sequence | MKIHEFQTKE LFRTYGIPTP EGRMVNTAEA AGEAAGELGG FPVVVKAQIH AGGRGKGGGV KLAKSADEAK SLAGAMLGSR LVTPQTGPEG TLVQKVLVEQ GVSIAKELYL SVVADRETAG IVIMASEAGG MDIEAVAETT PEKILKVFVN PLAGLSAFHC RQAAYGLNLP AEAIKPFTQV VSGLFKLFVD YDASLVEINP LILTTDKAVM ALDAKINFDD SALFRHKDIL ALRDTDEEDP LEVEASRFNL NYINMDGNVG NMVNGAGLAM ATMDIIKLAG AEPANFLDVG GGANAEMVEN GFRIILSDPK VKCILVNIFG GILRCDVLAS GIVQAARNTA IHVPLVVRME GTNVDEGKRI LAESGLDLHS AASLKDAAAR VAQVVAAA
|
| |