| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0059 |
|---|
| Symbol | |
|---|
| ID | 5692873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 65937 |
|---|
| End bp | 67118 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641262635 |
|---|
| Product | arginine biosynthesis bifunctional protein ArgJ |
|---|
| Protein accession | YP_001527946 |
|---|
| Protein GI | 158520076 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) |
|---|
| TIGRFAM ID | [TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTGCC CCGGTTTTCA ATGGGCCGGT GTGTGCGCGG GCATCAAAAA CTTGAAGAAA
AAAGACCTGG GCCTGCTGGT GTCTGACACG CCGGCCGCCG TGGCCGCGGT GTTTACCGCG
AACAGGGTCA AGGCTGCGCC CGTGCTGCTG GACATGGAGC GGGTGGCATC GGGCCGGTGC
CGGGCCATTG TGGCCAACAG CGGCAATGCC AACTGCTGCA CCGGGGATGC GGGGATGGCC
GCCGCCCTTG CCATGACAAA GGCCGTGGCC GAGGCCCTGG GCATTGATGA GGCCCTGGTG
CTGGTGGCCT CCACCGGCGT TATCGGGGCG CCCATGCCCA CGGAAACCAT CACCGGCGCC
GTGCCCGGCC TGGTAAAGGC GTTACGTCCG GACGGGCTGC CCGACTTTTC CGAAAGCATT
TTAACCACAG ACCGGTTTGC CAAAAGTGCC CTGCGAAACG TTCGCCTGGA AAACGGAACA
ACCGTCACGG TCTGCGCCAC GGCCAAGGGA GCCGGCATGA TCCGGCCGGA CATGGCCACC
ATGCTCTGCT TTGTCTGCAC CGACCTTCAG GCTGATACCG ACGCTCTTTC CGGCATGCTT
TCCGTTGCTG TGGACCGCTC CTTTAACCGC ATCACCGTGG ACGGCGACAC CAGCACCAAC
GACACGGTGT TTTTAATGGC CGGCGGCGCG TCCGGCGCGG GCCTGCAAAC GGATGCCGAC
CGGCAGGGAT TTCAACAGGC CCTGGACGAC GTGCTGACCG AGCTGGCCCG AATGATGGTG
ACGGACGGGG AGGGGGCCAC CAAGCTGGTG GAGGTGCGGG TGAAGGGGGC CAAGTCTGAC
GCCGATGCCC GGCGCGTGGC CGACACCGTG GCCAATTCCA GCCTTGTGAA AACCGCTTTT
TTCGGCCAGG ACGCCAACTG GGGCCGGATC ATGGCCGCCG CGGGCCGGGC CGGGGTGGAC
CTGTCCCCGG ACGCGGTGGA TATCTTTTTT GATGATGTGC AAATGGTGAA AAACGGCATG
GGATGCGGCC CCGAAGCCGA ACGCAAGGCG TCGGGGGTGC TCAAACAGCC GACCATCTGC
CTGGGCATTG ACCTGAACAC CGGCGGCACC GGCGCGGCAA CGGTGCTGAC CTGTGACCTG
TCTATTGAGT ATGTGAAGAT CAACGCCGAC TACCGGACAT GA
|
|---|
| Protein sequence | MECPGFQWAG VCAGIKNLKK KDLGLLVSDT PAAVAAVFTA NRVKAAPVLL DMERVASGRC
RAIVANSGNA NCCTGDAGMA AALAMTKAVA EALGIDEALV LVASTGVIGA PMPTETITGA
VPGLVKALRP DGLPDFSESI LTTDRFAKSA LRNVRLENGT TVTVCATAKG AGMIRPDMAT
MLCFVCTDLQ ADTDALSGML SVAVDRSFNR ITVDGDTSTN DTVFLMAGGA SGAGLQTDAD
RQGFQQALDD VLTELARMMV TDGEGATKLV EVRVKGAKSD ADARRVADTV ANSSLVKTAF
FGQDANWGRI MAAAGRAGVD LSPDAVDIFF DDVQMVKNGM GCGPEAERKA SGVLKQPTIC
LGIDLNTGGT GAATVLTCDL SIEYVKINAD YRT
|
|---|
| |