| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0054 |
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| Symbol | |
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| ID | 5692868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 60975 |
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| End bp | 62369 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641262630 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001527941 |
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| Protein GI | 158520071 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.536242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACCG ATCCGAACAC ACAGACAAAA AAAAGAGCTT CCCGAAGGCG GCGCAGCCGG
GCCGATAAGC CGGAGACGCC GGACACGCCG ACGCCTGCTG TCAAGGATGC CGAACCGTGG
GAGAGTTCAC AGTTTGACGT GCCCCCGGAC AAAAACCGGA CCCGCTTTCA CGACATGGAC
CTGCCCGATG CCCTGATGCA CGCCATCTAC GATCTGGGCT TTACCTACTG TACGCCCATT
CAGGCGGAGA TCCTGCCCAG CACCCTGGCC GGAAGGGACG CCTTTGGCCG GGCACAGACC
GGCACCGGCA AAACCGCGGC CTTTCTGATT TCCATTCTCA CCCACATGCA CAACAATCCT
ATTACAGCCG CACGGAAACC GGGAACGCCC CGGGCCCTGG TCCTGGCGCC CACGCGGGAG
CTGGTTATCC AGATCGGCGA AGAGGCCCAA CAGCTTGCCC GGCACCTTCC GGTCAACATC
GTGTCGGTGT TCGGCGGCAT GGACTTCAAA CAGCAGCAGG ACCGGCTGAC CCGGGAACCG
GTGGATATCA TCGTGGCCAC GCCGGGACGG CTGCTTGATT TTTCCCGGCG CCGGGCCGTG
ATGCTGAAGC AGGTGGAGAT TCTGGTGATT GACGAGGCCG ACCGCATGCT GGACATGGGT
TTTATTCCGG ATGTGCGCAA GATTATTTAC GCCACCCCCC AGAAGGGTAA CCGCCAGACC
CTGCTGTTCA GCGCCACCCT TACCGAGGCC ATCACCCGGC TGGCCTCGGC ATGGACCCGG
GACCCGGTAC AGGTGGCCAT TGAGCCGGAA CATGTGGCCG TGGATTCCGT GGACCAGGTT
GTCTATATCG TCACCAGTGA CCGAAAGCTT GCCCTGCTCT ACAACATTAT CGTTCAGCAG
AACCTGAGCC GTGTCCTGGT GTTCTGCAAC CGCAAGGACG CGGTCAGCCG CCTGGCCGAC
AGGTTGACCA GATACGGCAT CAAGTGCGAA ATACTCACCG GCGACGTGCC CCAGCAGAAG
CGGTCCCGCC GGCTTGAGGA TTTCAAGTCC GGAAAGATTC GTGTGCTGGT GGCCACCGAT
GTGATGGCCC GGGGCATTCA TGTTGAAGAC ATGGACCACG TGGTCAATTT TGACCTGCCC
CATGACCCGG AAGATTATGT GCACCGCATC GGCCGCACCG GCCGGGCCGG GGCCGTGGGC
ACCTCCATCA GCTTTGCCGA CGAACGGGAC TCTTTTTATA TTCCCGATAT TGAAGACTTT
ATGGAGCGGC CCCTTCCCTG CATTGAGCCC GACTCCACCT GGCTGGAGCT GCCGCCACCG
GCGGCCCCGA AAAAAGAGCG GCCCCGAAAA ACAACGCCCC GCACCGGCCG GGTGAAGAGC
ACCCCTGGAA AGTAA
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| Protein sequence | MQTDPNTQTK KRASRRRRSR ADKPETPDTP TPAVKDAEPW ESSQFDVPPD KNRTRFHDMD
LPDALMHAIY DLGFTYCTPI QAEILPSTLA GRDAFGRAQT GTGKTAAFLI SILTHMHNNP
ITAARKPGTP RALVLAPTRE LVIQIGEEAQ QLARHLPVNI VSVFGGMDFK QQQDRLTREP
VDIIVATPGR LLDFSRRRAV MLKQVEILVI DEADRMLDMG FIPDVRKIIY ATPQKGNRQT
LLFSATLTEA ITRLASAWTR DPVQVAIEPE HVAVDSVDQV VYIVTSDRKL ALLYNIIVQQ
NLSRVLVFCN RKDAVSRLAD RLTRYGIKCE ILTGDVPQQK RSRRLEDFKS GKIRVLVATD
VMARGIHVED MDHVVNFDLP HDPEDYVHRI GRTGRAGAVG TSISFADERD SFYIPDIEDF
MERPLPCIEP DSTWLELPPP AAPKKERPRK TTPRTGRVKS TPGK
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