Gene Dole_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0042 
SymbolpanC 
ID5692856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp50587 
End bp51408 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content59% 
IMG OID641262618 
Productpantoate--beta-alanine ligase 
Protein accessionYP_001527929 
Protein GI158520059 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00018] pantoate--beta-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.12642e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGCCC ATTCAGACCG CATGCGCAGG CAGGGCAAAA CCATCGCCTT TGTTCCCACC 
ATGGGCTTTC TTCATGAGGG ACATCTGTCC CTGCTTGAAA CCGGCAAGGC CCACGGGGAC
CATCTGGTGC TCAGCATTTT TGTCAACCCC ACCCAGTTTG CCGCGGGCGA GGATTTTGCG
TCCTATCCAA AAAGCTTTGA GAAAGACGCC CAGGCCGCGG AAAACCAGGG CGTGGACGTT
CTTTTCGCGC CGGAAGCAAC CGGTCTTTAC GAGCCGGGGT ATGAGACCTA TGTGTCGCTG
GAGTCCCTTC CCAACCACCT GTGCGGTATA TTCCGGCCCG CCCATTTTCG GGGGGTGGCC
ACGGTCGTGG CCAAGCTGTT TAATATCGTC AAACCCCATG TGGCCATCTT CGGGGAAAAG
GATTTTCAGC AGCTGGCCGT GATCCGGCGC ATGGCCCGGG ACATGAACTT TGACATAAAG
ATTATGGGCG CTCCTATTGT GCGGGAACCC GACGGCCTTG CCATGAGTTC CCGCAACACC
TATCTTAAAC CGGAACAGCG GCCGGCGGCC CTTTCCCTTT ATAAGTCCCT GGTTCTGGCC
CGGCAGATGG TTGCCGCCGG TGAAACAGGG GCGGCCGCCA TCATCGAAGC GGCCCGGAAC
CTGATAGCAG GTTTTTCCGA CACCGCCATT GATTATGTGG CCATCTGTGA TCCGGACACC
CTGGACGACA TGGACAGTCT CGACCGGCCG GCCCTCATGG CCCTGGCCGT GCGCGTGGGC
ACCTGCCGGC TGATTGATAA CATGATGCTG GTCCGGCCCT GA
 
Protein sequence
MQAHSDRMRR QGKTIAFVPT MGFLHEGHLS LLETGKAHGD HLVLSIFVNP TQFAAGEDFA 
SYPKSFEKDA QAAENQGVDV LFAPEATGLY EPGYETYVSL ESLPNHLCGI FRPAHFRGVA
TVVAKLFNIV KPHVAIFGEK DFQQLAVIRR MARDMNFDIK IMGAPIVREP DGLAMSSRNT
YLKPEQRPAA LSLYKSLVLA RQMVAAGETG AAAIIEAARN LIAGFSDTAI DYVAICDPDT
LDDMDSLDRP ALMALAVRVG TCRLIDNMML VRP