Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0040 |
Symbol | |
ID | 5692854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 46877 |
End bp | 49003 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641262616 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001527927 |
Protein GI | 158520057 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACAC AACCCGGCGT AAAACCCTGG ACAAAAATTC CCGACTATTT TGATGCCGCG GAAATGACCA CCGGCATTCT TGCCTTTAAT GAAGAAACCT GCAGGCGGTG CGGCATCTGC TCTTTTATCT GCCCGGCCCG GTCCATCAAA AGCGACCGGG GGCCCATGAA ATGGAAGGAA GGCATGCCGT GGCTGGCCAC GGTGGCGCCC GATGTTACCA ACTGCATTGC CTGCGGCTGC TGCCTGGCCG CCTGTCCGGA GGGGGCCATC ACCATCGAAC GGTGGTTTAA TCCCGGATAC TTTTATCAGC GACTCTCCCA GACCAGCGAC CTGGTCTATC CCAAGTGCTA CCTTTCGACA GACCCCGCGC CGGCGGACAC GTGGCCCGCG CCGGACCCGG ACATGCTTTC TCCCCGGTAC GGTTCCCGGG AAAAGTGGGG CATGCGGGCC AACCGTCTCC GTATGACCGG CAACGTGATT TTGGGCGGTT CCCGGTTTTT TTTAAACGAG GCCCTTCGCG GCCGGCTGTT TTCGACGGTA AACGGCTTTT TATCCAAAAC CCCGTCTGAC ATCTCCTGGA CTGACCTGCT GGAGGAAAAC GCCCGCCGGG TGCCGGACAA ACCCTTTCTG GTGTATCAAA ACGAGTCGTA CACCTACCGC CAGGTCGATG AACAGGCCAA CCGGATGGCC CGGTTTCTTC TTGCTTTGGG CGGTGGCCAG GGGTCCGGCG TGGGCATTCT GATGCGCAAT TCCCCCCGGT TTCTGGATAT TTTTTTCGGC GCCCAGAAGA TCGGCATGTA CGTGGTGCCC ATCAACCCGG AGCTCAAGGG TGACGGCCTT GCCTACATCA TCAACCACAG TGACATCGAC CTGCTGGTGG CCGACGCCGA ACTGGCAGAC GCGGTCCGGT CGGTTGCGGA CCGTTTTGAA CAGCGCAAAA AAATCATTGT CAACGACATC GAAGCCGAGG CCCGGGGAAT GGCCGTTCCC GAAACCATGG ACCGGCTGAG CCGGGCCTAT GCCGATTTTT CGCCCCAACA CCCGGGCACC GGTTATCGGC CGGAAGACAT CTGCATGATC ATGTACACCT CCGGCACCAC CGGTCCGCCC AAGGGGGTTG TGTATCGCTA CAACAAAACC TCGGTCCGGC TGATGTGCCT GGCGGCTCAC CTGATGCTCA GGCCGAGCGA CACCTACTAT ACGCCCTATG CCCTTTGCCA CGGCAACGCG CTGCTGGCCA CCACCACCAT GACCATGGGG GTTCGGGCCA CCATGGCCCT GGCAAGAAAA TTTTCCGCCA GCCGCTTCTG GGAGGATGTG CGCCGGCACC GGGCCACGGT ATTCAACACC ATCGGCTCGA TCATTCCCAT TCTCATGAAA CAGCCGGAAA AGCCCGATGA TGCCGACAAT CATGTCCGGT TTGTCACCTC CTCCGGGTGT CCGCCGGAGA TGTGGGGGCC GTTTGAAAAA CGGTTCGGGG TCAAGCTTTA CGAGGCCTAC GGCGCCATTG ACGGCGGCGG CAAAGGCATC TTCAACTTCG GCACGGCACC GGCCGGCTCC CTGGGCCGGA TTCCCCGGGT GGTAAACTAC CGGCTGGTGG ACGACAGGGG CCGGGACGTG CCTGTCGGTG TGCCGGGTGA ACTGCTCTTT GAGGCAAAAA AGACATCCGG CCGGGTGGAG TATTACAAAA ACCCGGCAGC CAGCCGGAAA AAATCCGGTG ACGGGTGGCT GCATACCGGG GACCTGGTAA AACAGGACAT CAACGGGTTT CTTTATTTTG TGGGCCGCAA CACCGAATCC ATGCGAAAGG GAGGGGAAAA CGTCTCCGCC TATGAAGTGG AGCAGGTGAT CATGGACCAT CCGGCCGTTG AGGAAGCGGC GGTCTATGCC GTGCCCTCGG ACCTGGCCGA AGACGACATT CTGGCCGCTG TCCGCCTGGT GGCAACCAAA ACCCTGACCC CTGAAGACCT GATCGCCTTT CTTTCCGACA GGCTGGCCCG GTTTGCCGTT CCCCGGTATA TCCGGTTTAT GGATGAATTT CCCAAGACCA GCTCCCACCG GATCATCAAG GGCGTGCTGG AAAAAGAGGG CATCACGGAC GACACGTTTG ACGCGCAACA GGCATAG
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Protein sequence | MTTQPGVKPW TKIPDYFDAA EMTTGILAFN EETCRRCGIC SFICPARSIK SDRGPMKWKE GMPWLATVAP DVTNCIACGC CLAACPEGAI TIERWFNPGY FYQRLSQTSD LVYPKCYLST DPAPADTWPA PDPDMLSPRY GSREKWGMRA NRLRMTGNVI LGGSRFFLNE ALRGRLFSTV NGFLSKTPSD ISWTDLLEEN ARRVPDKPFL VYQNESYTYR QVDEQANRMA RFLLALGGGQ GSGVGILMRN SPRFLDIFFG AQKIGMYVVP INPELKGDGL AYIINHSDID LLVADAELAD AVRSVADRFE QRKKIIVNDI EAEARGMAVP ETMDRLSRAY ADFSPQHPGT GYRPEDICMI MYTSGTTGPP KGVVYRYNKT SVRLMCLAAH LMLRPSDTYY TPYALCHGNA LLATTTMTMG VRATMALARK FSASRFWEDV RRHRATVFNT IGSIIPILMK QPEKPDDADN HVRFVTSSGC PPEMWGPFEK RFGVKLYEAY GAIDGGGKGI FNFGTAPAGS LGRIPRVVNY RLVDDRGRDV PVGVPGELLF EAKKTSGRVE YYKNPAASRK KSGDGWLHTG DLVKQDINGF LYFVGRNTES MRKGGENVSA YEVEQVIMDH PAVEEAAVYA VPSDLAEDDI LAAVRLVATK TLTPEDLIAF LSDRLARFAV PRYIRFMDEF PKTSSHRIIK GVLEKEGITD DTFDAQQA
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