Gene Dole_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0034 
Symbol 
ID5692848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp38838 
End bp41114 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content59% 
IMG OID641262610 
ProductTPR repeat-containing adenylate/guanylate cyclase 
Protein accessionYP_001527921 
Protein GI158520051 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.5313e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTTT TGAAAAAAAG CGGTCGCGCA ATAAAAACGG TCTTTTCACG CAAGCCCCTG 
CTGCTCTCTT TCTGTATCGT GGTGGCAGGC GCGCTTGTCT TCATGTCCGG CATCAGCTTC
CTGGATATCA TTGAGCTGAA AACCATTGAC ATGCGGTTCA AGCTCCGGGG GGATATCCCG
CCCGGCGACA GGGTGGTGCT GGCGGCCATT GATGAAAAAA GCCTGAAACA GGAGGGCCGG
TGGGTGTGGC CCCGCACCAA GATAGCGGCC CTGGTGGACA AGCTTTCCGA AAAAGGGGCA
CGGGTCATCG CCTTTGATGT GGGGTTTTTC GAACCGGAAA GCTCCGAGGT TATCCAGACC
ATCGGGCGCA TTCAGGCGGC GTCAAAGGAC AACGCCCTGC GGAACAAGCG ATTCGACGAC
TACCTGGCCA CACTGAAAAA CCGGTCGGAC AACGACCGGA TTCTGGTGGA AGCCATTCAG
CGCTCCAGGG CAACGGTGGT GCTGGGGTTC TTTTTTCAGA TGAACCCCGA AGACGCCCTG
CATATCACCG AAGCGGAGAT TGAAACACAC ACCCGGCAAA TCGCTGGCGG CCGTTACACC
ATTGAACGGT TCAGTTCGGA CCGGGCCAGG GAGGCGTGGC TCTATCGGGT GGCGGCCCCC
CAGTCCAACA TTCAGGCGAT TTCAGAGGCC ACCTCCTATG CCGGATATTT CAACAAGTTG
GCCGATCCGG ACGGCGTGGT GCGCCGCATG ACCATGGTGA TGCAGTTCAA CAACACCCTT
TACGCCCCTC TCTCCCTGAA GGCGGCCGGC GCCTACCTGG ACGCCCCCCT CTCCATTACC
GTGGAGGAGG ACTATGGCGT GGCCTCCCTG ATGCTGGGGG ACCTGTCCAT ACCCGTGGAT
GAACGGGGTG ATCTGCTGAT CAACTACCGG GGACCGGAAA AGACCTTTCC CCATATTTCG
GTCACCGACA TTCTCAACGA CACGGTGGAT GAAAGCCTGA TCCGGGACAA GATCGTTCTG
GTGGGAGCCA CGGCCATCGG CATTCACGAC GAATGCGTGA CGCCGGTGGC CAAGGTGTTT
CCCGGGCCCG AGGTCCACCT CAACGTCATC GACGCCATCC TGTCTGAAGA TTTTCTGTTT
CACCCGGCCT GGGCCGCGCT GTTTGACCTT CTGGTCATCA TCGGCGGCGG TATGCTGCTG
GCTTATGTGC TGCTGAAAAC CAGCGCCCTG CCCGGCGGCC TCGCCATGGC CGCCATGTTC
GGCGGGTACC TCTGGCTGTG CCAGTTTTTC TTCACCCACA TGGGGTGGAT TCTTAACATG
GTCTATCCCC TGTGCGTGTT TCTGGCGATC TACCTGTTTG TGACCTCTTA CAAATACCTG
TCTGAAGAGG GGCAGAAAAA ATTTATCCGG GAGGCCTTTT CCAAGTACCT GGCACCGGAG
GTGGTCAACC AGCTGATCTC CTCGCCCCAG AAGCTGGTAC TGGGCGGCGA GCGCCGGGAG
ATAACCGCTT TTTTCTCCGA TGTCCAGGGA TTTACCAGCA TTTCCGAAAA GCTCGCCCCT
GAAGAGCTGG TGGAGCTGCT CAATGATTTT TTAACCGAGG TCACCGACAT CATCCTTCAT
CACAAAGGGG CCGTGGACAA GTTCGAGGGA GACGCGGTCA TCGCCTTTTT CGGCGCCCCC
AACGAGCTTC CCAACCATCC CGAAGCGGCC TGCCTGGCCT GTATTGATAT TCAGAAACGG
ATGGTCGAGC TTCGCGCCAA ATGGCGGGAG CAGGGCAAAC CCGAACTCAA GGTGCGCATC
GGTCTTTATT CCGGACCGGC CGTCGTGGGT AACATGGGTT CCAGAAACCG CATGGACTAC
ACCATGATGG GCGACACCGT GAACACCGCC GCCCGGCTGG AAGGGGTCAA CAAAATATAC
GGCACTTATA CCATGGTCGG CCAGCCGACC TACGAGGCCG CGGCCGACGC CCTGTTCGCC
CGGGAGCTGG ATGCCGTCAC CGTGGTGGGC AAAAAGACGC CGGTGGCCAT TTACGAGGTC
CTCGGCCGCC GGGGCGAGGT GGACGAAACC GGGGTAAAAA CCACCGAGGT CTATGCCAAG
GGACTGGCGG CATACCGTCA GAGACAATGG GACCAGGCCG TCGCCTGGTT CAAGGAAGCC
CTGGCCGTCA CCCCGGATGA CGGCCCCAGC CTGACCATGA TCCGCCGGTG CGAGGCCTAT
GCCGAAAATC CGCCCCCCGA TGACTGGAAC GGGGCCTTTT CCATGATGAC CAAGTAA
 
Protein sequence
MDLLKKSGRA IKTVFSRKPL LLSFCIVVAG ALVFMSGISF LDIIELKTID MRFKLRGDIP 
PGDRVVLAAI DEKSLKQEGR WVWPRTKIAA LVDKLSEKGA RVIAFDVGFF EPESSEVIQT
IGRIQAASKD NALRNKRFDD YLATLKNRSD NDRILVEAIQ RSRATVVLGF FFQMNPEDAL
HITEAEIETH TRQIAGGRYT IERFSSDRAR EAWLYRVAAP QSNIQAISEA TSYAGYFNKL
ADPDGVVRRM TMVMQFNNTL YAPLSLKAAG AYLDAPLSIT VEEDYGVASL MLGDLSIPVD
ERGDLLINYR GPEKTFPHIS VTDILNDTVD ESLIRDKIVL VGATAIGIHD ECVTPVAKVF
PGPEVHLNVI DAILSEDFLF HPAWAALFDL LVIIGGGMLL AYVLLKTSAL PGGLAMAAMF
GGYLWLCQFF FTHMGWILNM VYPLCVFLAI YLFVTSYKYL SEEGQKKFIR EAFSKYLAPE
VVNQLISSPQ KLVLGGERRE ITAFFSDVQG FTSISEKLAP EELVELLNDF LTEVTDIILH
HKGAVDKFEG DAVIAFFGAP NELPNHPEAA CLACIDIQKR MVELRAKWRE QGKPELKVRI
GLYSGPAVVG NMGSRNRMDY TMMGDTVNTA ARLEGVNKIY GTYTMVGQPT YEAAADALFA
RELDAVTVVG KKTPVAIYEV LGRRGEVDET GVKTTEVYAK GLAAYRQRQW DQAVAWFKEA
LAVTPDDGPS LTMIRRCEAY AENPPPDDWN GAFSMMTK