| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0029 |
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| Symbol | |
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| ID | 5692843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 30274 |
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| End bp | 30918 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641262605 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001527916 |
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| Protein GI | 158520046 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.317943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCAAGG TTCTGGTGGC TGATGATCAC AAGATAATTC GGGAGGGCCT GTGCAACATG
CTGGATGCCG AGCCCGACCT GAAGGTGGTG GGTGCGGCGA GCAACGGACG GGAGGCCCTT
GCCCTGGCCA GAAAGCTGTC GCCGGACGTG GTGATCATGG ATATCAGCAT GCCGGAGCTC
AACGGCATTG AGGCGACCCG GCAGATACGG GCCGAAGCGC CCCAGGCCGC GGTGATCGCG
CTTTCCATGT ACGCGGACAA GCGGTATGTG CTGGGCATGC TCAAGGCCGG GGTGGCCGGC
TACCTGATCA AGGACTGCGC TTTTGAGGAA CTGGCCCGGG CCGTTGTCGT GGTGCATCGC
GGCGAAACCT ACCTGAGCCC GGCCATAGCG GACACGGTGC GAAAGGTTCT GGTGACCCGG
ATCGATCAGG ACCCGCTGAC CCGGGTGGAG GAACTGACCG AGCGGGAACG GCAGGTGTTG
CAGATGATCG CCGAGGGCAT AAAGACAAAA GATATTGCCG AGTCCCTTCA CATCAGCGTC
AAGACAGTGG AAACCTACAG AAGCAGCATC ATGCAGAAGC TCGGCCTGTT TTCCGTGGCG
GAACTGACCA AGTTCGCCGT CCGGGAGGGG ATAACCCCCC CTTGA
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| Protein sequence | MIKVLVADDH KIIREGLCNM LDAEPDLKVV GAASNGREAL ALARKLSPDV VIMDISMPEL
NGIEATRQIR AEAPQAAVIA LSMYADKRYV LGMLKAGVAG YLIKDCAFEE LARAVVVVHR
GETYLSPAIA DTVRKVLVTR IDQDPLTRVE ELTERERQVL QMIAEGIKTK DIAESLHISV
KTVETYRSSI MQKLGLFSVA ELTKFAVREG ITPP
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