Gene Dole_0027 details

Gene Information

• Locus tag: Dole_0027
• ID: 5692841
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 28802
• End bp: 29572
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641262603
• Product: hypothetical protein
• Protein accession: YP_001527914
• Protein GI: 158520044

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000116236
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAT TATGGATCGG CCTGGCTCTG GCACTGCTGC TGGCCGTGCC CGCCACATCG 
TTTGCCATCG GCCTGGAAGC GGCCATCGGC GGCTGGGGTC AGGATATATC CGGCGACATG 
GCATACAAAC CCCTCAACCC CATCACCGAC GTCATCGACT TTGAAAGGGA CCTGGGCTAT 
GACAGTGAGA CGCGGGTCAT GGGCCGGGTG CGCATCGACA TGCCCCTTAT CATTCCCAAC 
ATCTATGTGA TGGCAACCCC CATGGAGTTC GAAGGCACCA GTCAGCAGGC CGTAGAGTTC 
AAATTTGGTA ACGACACCTT CGAGGCAGAC ATTCCCTATA CTTCCAAACT CTCCATGAAC 
CATGTGGACG TGGCCCTGTT CTACAGCATT CCGTTGCTGG AAATGGCCAC ATTCAACAGG 
CTCAACATCG ATCTGGGTAT CAACCTGAAA GTGGCGGACC TGTCCGCGGA AATTACCCAG 
CCGGACACCG GCCTTTCTGA AAAAGAGGAC TATGTGCTGC CCATTCCCAT GGCGTTTGCC 
GCGGTCCAGC TCAAACCCAT CGACCTTCTG GCCATCGAGG CCGAGGGCCG GGGCATCTCC 
TACAGCGGCA ACCACCTGTT CAACGTCATC GGACGGGTAA AGGTCAAGCC CTTTGGCCCC 
TTTTTTATTG CCGGCGGCTA CCGGTACGAC AGCATCAAGC TGGATGAAAA AGACCTTCGG 
CTCGACGCAC AGGTGGACGG GTTCTTTGCC GAAACCGGGT TTGAGTTTTA A 

 

Protein sequence

MKKLWIGLAL ALLLAVPATS FAIGLEAAIG GWGQDISGDM AYKPLNPITD VIDFERDLGY 
DSETRVMGRV RIDMPLIIPN IYVMATPMEF EGTSQQAVEF KFGNDTFEAD IPYTSKLSMN 
HVDVALFYSI PLLEMATFNR LNIDLGINLK VADLSAEITQ PDTGLSEKED YVLPIPMAFA 
AVQLKPIDLL AIEAEGRGIS YSGNHLFNVI GRVKVKPFGP FFIAGGYRYD SIKLDEKDLR 
LDAQVDGFFA ETGFEF