Gene Dole_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0026 
Symbol 
ID5692840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp27261 
End bp28541 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content57% 
IMG OID641262602 
Productcitrate synthase I 
Protein accessionYP_001527913 
Protein GI158520043 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01798] citrate synthase I (hexameric type) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.69449e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAAA CCGCCACTAT TGTAATTAAT GGAAAAACAT ATGAATTCCC GGTAATTACC 
GGAACAGAAG GCGAAAAGGC CATCGACATT CGGGAGCTTC GGGCCAAAAC CGGCTACATC
ACCTTTGACC CGGGTTTCAG CAACAGCGGC AGCTGCACCA GCACCATCAC CTACATGGAC
GGCGCCAAGG GGGTCCTGCG TTACAGGGGG TATCCTATTG AACAACTCGC CGAGACAAGC
TGTTTTGTGG AGGTGTGTTA CCTGCTGTTA AACGGAGACC TGCCCTCCCG GGCCGAATAC
CAGCGCATGA GCGTCATGCT CAACGACCAC TCCCTGGTCC ATGAGGACAT GCAGATCTTT
TTCCAGAATT TTCCCCGGTC GGCAAACCCC ATGGGCATTC TCTCCTCCAT GGTCAACGCC
CTGCGCAGCT TTTATCCCGA ACTGATGACC ACGGAAGAGG CCATAGAGAC CACCTTTCTG
CGGCTGATCT CCAAGGTGCG CACCATGGCG GCCATGTCCC ACCGGATCTC CCGTGGTCAC
AAGATCGTCT ATCCCCGGCC CGACTACTCC TACTGCGCCA ATTTTCTGAA CATGATGCAC
GACTCCCCGG TGCGGCCCTA TGAGATCAAA AAGGAGTTTG TGGAGGCGTT GAACATGTTC
TGGGTGTTGC ATGCCGACCA TGAGCAGAAC TGCTCCACCT CAACGGTGCG GGCCGTGGGC
AGCGCCCGGG CCAATATCTA CGCGGCCCTG TCCGCCGGTA TCGCGGCCCT GTGGGGCCCC
CTGCACGGCG GCGCCAACCG GGCCGTTGTG GAGATGTTCG AAGATATCCG CAAGAGCGGC
GGGGACGTGA AAAAGGCGGT CAAGCGGGCC AAGGACAAGA ACGATCCGTT CCGGCTGATG
GGGTTTGGCC ACAGCGTCTA CAAGACCTAT GATCCACGGG CCAAGATCAT GAAAAAAATG
TGCGACAAGG TGCTGGCCGT GGCCAACACA GAGGACCCCC TGCTGGATAT CGCCATGGAA
CTGGAGGAGG TGGCCTTAAA GGACAGTTAC TTTACGGACC ACAACCTCTA TCCCAACATC
GATTTTTACA GCGGCATCGT GCTGCGGACC CTTGGCATTC CGGTGGAGAT GTTTACCGTG
ATGTTTGCCA TCGGCCGGCT GCCGGGATGG ATCGCCCAGT GGAAAGAGCT GATGGACGAT
CCGTTCAAGA AGCTTTTCCG GCCCCGCCAG ATTTACGTGG GCGAAACCAT GCGGGAAGTG
CTTCCCATCG ACGAACGGTA G
 
Protein sequence
MTETATIVIN GKTYEFPVIT GTEGEKAIDI RELRAKTGYI TFDPGFSNSG SCTSTITYMD 
GAKGVLRYRG YPIEQLAETS CFVEVCYLLL NGDLPSRAEY QRMSVMLNDH SLVHEDMQIF
FQNFPRSANP MGILSSMVNA LRSFYPELMT TEEAIETTFL RLISKVRTMA AMSHRISRGH
KIVYPRPDYS YCANFLNMMH DSPVRPYEIK KEFVEALNMF WVLHADHEQN CSTSTVRAVG
SARANIYAAL SAGIAALWGP LHGGANRAVV EMFEDIRKSG GDVKKAVKRA KDKNDPFRLM
GFGHSVYKTY DPRAKIMKKM CDKVLAVANT EDPLLDIAME LEEVALKDSY FTDHNLYPNI
DFYSGIVLRT LGIPVEMFTV MFAIGRLPGW IAQWKELMDD PFKKLFRPRQ IYVGETMREV
LPIDER