| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0021 |
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| Symbol | |
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| ID | 5692835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 22361 |
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| End bp | 23017 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641262597 |
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| Product | hydrolase |
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| Protein accession | YP_001527908 |
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| Protein GI | 158520038 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.993674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGACA CGACACGGCA GACCGTTAAA ATCATCGCCT TTGACTGCGA CGGAGTCCTG
TTTGACACGG ATGACGCCAA CCGGGCCTAC TACAACCGCA TTTTGGTCAA CATGGGGCTG
CCGGAGATGA CCGACGCCCA GTTTAGTTAT GTGCAGATGC ACACGGTCAA CGACTCTCTG
GCTTTTCTCT GTGGAGCAGA TGGCCTGGAC CGGGCACAAG CACTTCGAAA AGGATTGGGG
TATGGTCCGT TTATCCGGCA CATGAAAAAA GCCCCCGGCC TGGAAGACCT GCTGGACCGG
CTTTACAACA GGGTCCATAC CGCCATTGCC ACCAACCGCT CCAACACCAT GAACCGGGTC
CTGGCCGAGC ATGGCCTTGC CGACAGGTTC GAGATGGTGG TCACGGCCTT GGACGTGATG
CGGCCAAAGC CGGCCCCGGA GCAGCTGTTA AAAATTCTCG ACCGCTTTGG CGCGGCCCCC
TCAGAAATGA TTTACATCGG TGACTCGGAA CTGGATGAAC GGGCCGCAAC CTCGGCCCAG
GTGCCGTTTA TCGCCTACAA CAACCCGGCA CTGAAAGCCG ATTTTCACGC CCCTGACATG
CGGGCCGTGG GGACCATCCT GGACCGGTTT TCCCTGGCAG GCCGGACCGG GGAATAG
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| Protein sequence | MSDTTRQTVK IIAFDCDGVL FDTDDANRAY YNRILVNMGL PEMTDAQFSY VQMHTVNDSL
AFLCGADGLD RAQALRKGLG YGPFIRHMKK APGLEDLLDR LYNRVHTAIA TNRSNTMNRV
LAEHGLADRF EMVVTALDVM RPKPAPEQLL KILDRFGAAP SEMIYIGDSE LDERAATSAQ
VPFIAYNNPA LKADFHAPDM RAVGTILDRF SLAGRTGE
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