| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0013 |
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| Symbol | |
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| ID | 5692827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 13760 |
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| End bp | 15190 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641262589 |
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| Product | glutamyl-tRNA(Gln) amidotransferase, B subunit |
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| Protein accession | YP_001527900 |
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| Protein GI | 158520030 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000416618 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTTG AATCTGTCAT CGGCCTGGAA GTCCATGCCC AGCTGAAAAC CGGAACCAAG
ATATTCTGCG GCTGCTCCAC GGGTTTCGGA GCCCCGCCCA ATACGCACAC CTGTCCGGTG
TGTACCGGCA TGCCCGGTAC GCTGCCGGTG CTCAACCGAA CCGTGGTGGA TTACGCGTTG
AAAATGGCGC TGGCGGTCAA CTGCCGCATT CGGTCCGTGA GCCGGTTTGC CCGGAAAAAC
TATTTTTATC CGGACCTGCC CAAGGGCTAC CAGATATCCC AGTACGAATT GCCCATTGCC
GAACACGGCG AGGTTGTTAT TGATACCGGC AACGGGGAGC AAAAGCGCGT CGGCATCACC
CGGATTCACA TGGAAGAGGA CGCGGGCAAG CTGATTCACG ATGCCTCCCG GCCGGTCTCC
TACGTGGACT ACAACCGTAC CGGCGTGCCC CTGATCGAGA TCGTCAGCGA GCCGGACATG
CGTTCCCCCC GGGAGGCCGG GGCCTACCTG CGGGAGCTGC GGTCCCTTCT TCGCTGGCTG
GACATCTCCG ACGGCAACAT GGAGGAGGGC TCCTTCCGGT GCGACGCCAA CGTGTCGATC
CGGCCCAGTG GCAGCACCGC GCTGGGCACC CGCACCGAAA TCAAGAACTT AAACTCCTTT
CGCCATGTGG AGCAGGCCCT TGCTTACGAA ATCCGGCGCC ATGCCGACCG GGTCTCCGAA
GGCGGAGCCG TGGAGCAGGA GACCCGGCTC TGGAACCCGG AAAAGATGGT GACCGTCTCC
ATGCGGGGAA AGGAGGACGC TCACGACTAC CGCTATTTTC CCGACCCCGA TCTTTTGCCC
CTGGTGGTCG ACGATGCCTG GAAAGACAGA ATTCAGGCCA CGCTGCCCGA GCTGCCGGCT
TTTCGAAAAA AGCGGTTTGT CGCCGACTAC GGCCTGTCCG AAGAGGATGC CGGCGTGCTT
ACCGGTTCCA GGGCACTGGC CGACTATTTT GAGGCGTGCG CGGCCGAAGC CAAAACCCCC
AAGCCCTGCG CCAACTGGAT CATGGGGGAC CTGCTGGGCC TGCTTAACGC CACGGCCACG
CCCATTGAGG CATCACCGGT TTCGCCGGTC CACCTGGGCC GGCTGGTGGG CCTGATCAAC
GACAACGTGA TTTCCGGCAA GATTGCCAAG ACCGTTTTTG AAGAGATGGC CCGTACCGGC
CAGGATCCAA AGGCCATTGT CGAGGCCCGG AACCTGGTCC AGGTCACCGA CACCGGCGCC
ATCGGCGCGG CCATTGACCA GGTGATTGCC GAGTGCCCCG ACGAGGTGGA AAAATATAAA
AGCGGCAAAA CCAAGGTAAT GGGGTTTCTG GTGGGCCAGG TCATGAAAAA AACAAAAGGA
AAGGCCAACC CCCAGGCGGT AAACGATCTG TTGGCCGAAA AACTCAGGTG A
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| Protein sequence | MAFESVIGLE VHAQLKTGTK IFCGCSTGFG APPNTHTCPV CTGMPGTLPV LNRTVVDYAL
KMALAVNCRI RSVSRFARKN YFYPDLPKGY QISQYELPIA EHGEVVIDTG NGEQKRVGIT
RIHMEEDAGK LIHDASRPVS YVDYNRTGVP LIEIVSEPDM RSPREAGAYL RELRSLLRWL
DISDGNMEEG SFRCDANVSI RPSGSTALGT RTEIKNLNSF RHVEQALAYE IRRHADRVSE
GGAVEQETRL WNPEKMVTVS MRGKEDAHDY RYFPDPDLLP LVVDDAWKDR IQATLPELPA
FRKKRFVADY GLSEEDAGVL TGSRALADYF EACAAEAKTP KPCANWIMGD LLGLLNATAT
PIEASPVSPV HLGRLVGLIN DNVISGKIAK TVFEEMARTG QDPKAIVEAR NLVQVTDTGA
IGAAIDQVIA ECPDEVEKYK SGKTKVMGFL VGQVMKKTKG KANPQAVNDL LAEKLR
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