Gene Dole_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0013 
Symbol 
ID5692827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp13760 
End bp15190 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content61% 
IMG OID641262589 
Productglutamyl-tRNA(Gln) amidotransferase, B subunit 
Protein accessionYP_001527900 
Protein GI158520030 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 
TIGRFAM ID[TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.16618e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTTG AATCTGTCAT CGGCCTGGAA GTCCATGCCC AGCTGAAAAC CGGAACCAAG 
ATATTCTGCG GCTGCTCCAC GGGTTTCGGA GCCCCGCCCA ATACGCACAC CTGTCCGGTG
TGTACCGGCA TGCCCGGTAC GCTGCCGGTG CTCAACCGAA CCGTGGTGGA TTACGCGTTG
AAAATGGCGC TGGCGGTCAA CTGCCGCATT CGGTCCGTGA GCCGGTTTGC CCGGAAAAAC
TATTTTTATC CGGACCTGCC CAAGGGCTAC CAGATATCCC AGTACGAATT GCCCATTGCC
GAACACGGCG AGGTTGTTAT TGATACCGGC AACGGGGAGC AAAAGCGCGT CGGCATCACC
CGGATTCACA TGGAAGAGGA CGCGGGCAAG CTGATTCACG ATGCCTCCCG GCCGGTCTCC
TACGTGGACT ACAACCGTAC CGGCGTGCCC CTGATCGAGA TCGTCAGCGA GCCGGACATG
CGTTCCCCCC GGGAGGCCGG GGCCTACCTG CGGGAGCTGC GGTCCCTTCT TCGCTGGCTG
GACATCTCCG ACGGCAACAT GGAGGAGGGC TCCTTCCGGT GCGACGCCAA CGTGTCGATC
CGGCCCAGTG GCAGCACCGC GCTGGGCACC CGCACCGAAA TCAAGAACTT AAACTCCTTT
CGCCATGTGG AGCAGGCCCT TGCTTACGAA ATCCGGCGCC ATGCCGACCG GGTCTCCGAA
GGCGGAGCCG TGGAGCAGGA GACCCGGCTC TGGAACCCGG AAAAGATGGT GACCGTCTCC
ATGCGGGGAA AGGAGGACGC TCACGACTAC CGCTATTTTC CCGACCCCGA TCTTTTGCCC
CTGGTGGTCG ACGATGCCTG GAAAGACAGA ATTCAGGCCA CGCTGCCCGA GCTGCCGGCT
TTTCGAAAAA AGCGGTTTGT CGCCGACTAC GGCCTGTCCG AAGAGGATGC CGGCGTGCTT
ACCGGTTCCA GGGCACTGGC CGACTATTTT GAGGCGTGCG CGGCCGAAGC CAAAACCCCC
AAGCCCTGCG CCAACTGGAT CATGGGGGAC CTGCTGGGCC TGCTTAACGC CACGGCCACG
CCCATTGAGG CATCACCGGT TTCGCCGGTC CACCTGGGCC GGCTGGTGGG CCTGATCAAC
GACAACGTGA TTTCCGGCAA GATTGCCAAG ACCGTTTTTG AAGAGATGGC CCGTACCGGC
CAGGATCCAA AGGCCATTGT CGAGGCCCGG AACCTGGTCC AGGTCACCGA CACCGGCGCC
ATCGGCGCGG CCATTGACCA GGTGATTGCC GAGTGCCCCG ACGAGGTGGA AAAATATAAA
AGCGGCAAAA CCAAGGTAAT GGGGTTTCTG GTGGGCCAGG TCATGAAAAA AACAAAAGGA
AAGGCCAACC CCCAGGCGGT AAACGATCTG TTGGCCGAAA AACTCAGGTG A
 
Protein sequence
MAFESVIGLE VHAQLKTGTK IFCGCSTGFG APPNTHTCPV CTGMPGTLPV LNRTVVDYAL 
KMALAVNCRI RSVSRFARKN YFYPDLPKGY QISQYELPIA EHGEVVIDTG NGEQKRVGIT
RIHMEEDAGK LIHDASRPVS YVDYNRTGVP LIEIVSEPDM RSPREAGAYL RELRSLLRWL
DISDGNMEEG SFRCDANVSI RPSGSTALGT RTEIKNLNSF RHVEQALAYE IRRHADRVSE
GGAVEQETRL WNPEKMVTVS MRGKEDAHDY RYFPDPDLLP LVVDDAWKDR IQATLPELPA
FRKKRFVADY GLSEEDAGVL TGSRALADYF EACAAEAKTP KPCANWIMGD LLGLLNATAT
PIEASPVSPV HLGRLVGLIN DNVISGKIAK TVFEEMARTG QDPKAIVEAR NLVQVTDTGA
IGAAIDQVIA ECPDEVEKYK SGKTKVMGFL VGQVMKKTKG KANPQAVNDL LAEKLR