| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0012 |
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| Symbol | |
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| ID | 5692826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 11993 |
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| End bp | 13690 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641262588 |
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| Product | integrin-like repeat-containing protein |
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| Protein accession | YP_001527899 |
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| Protein GI | 158520029 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000257714 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCGTA TTTTCGTTTG CAGAATTCTT TTTTTGGCCG TGTTCCTGCT GCCGGGCCTG
TCTGGCGGCG CGGCCCATGC CCGGGTGGCG AGCCTTGCCA TCACCCCCTT TGCCATCAAC
GCCGAAACTG ATCTTTCCTA CCTTTCCAGG GGCGCGGCCG AGATGCTGGC CTCGCGCATC
GCGGCCCAGT CCGACGTGTC GGTGATGGAC ATGGCCCTGG TGGCCGATGC CGCGGCACGT
GCCCCGCAGC CCCTGACCCG CGCCGGCGCC GTGGCCCTGG GACGACAGCT GAATGCCGAC
TACGTGCTGT TCGGCAGCAT TACCGTGCTG GGCGGGCCTG TGAGCATGGA TGTGAACGTG
ATTCCCGTGG CCGAGGGCAG TGGTCCGCCG GCCGCCTTTT ACAAGCAGGC CGATTCCATT
GCCGGCGTGA TTCCGGCGGT GGGGGCCCTG GCCGGGGAGA TTCGCACAAC CGTGTTTGCC
GCCGCGCCTT TGGGTGACAG CACCGTGACG ACCCCGTCCG CGGCCGCACC CACGGAAACC
GGGCCACCGG CCCCGGTCCC GGTGGCCGTG CCGGCAGGCG CCCCGGCCGG GGCCGTGATG
GCCGCTCGGG CACCGGCGCC TGCCGGAGAG AGAACAACGG ATGCCGGGTC ATCCGCCTTT
GTGGTGTCAG GCCAGCCCGG CCAGGAACAG GACTTCTGGA AGAGCCAGGA TTTTGAGGCC
GAGATTCGCG GCCTGGCCCT GGCCGATGTC TCCGGTGACG GCAAGACTGA AACCGTGCTG
CTTACCGACA GGCTGCTCAC GGTGCGGCGC CTGGAGCAGG GCCGGTTTTA CAAGCTGGCC
GAGCACCGCC TGGCCGGCTA CGAAAACCCC CTGGCCGTGG ATGCCGTGGA TACGGACAAC
AACGGCCAGG CCGAGATCTT TGTCACCTGC ATCAACAAGA CCACCGGGGC ACTGGCCTCC
TTTGTGCTGG AACTTTCCGA CCGGACCCTG ACAACGGTGG CCCAAAAACA GGCCTGGTAT
TTCCGCTCCA TGGGGGATGG CGCCATTTAC GGTCAGAAAA AAGGACTTGG CATGGCCGAT
ATTTTTCTGC CCGGCATTTT TCGCCTGGCC CGGCAGGGCG GCCAATACAC GGCCCAGGCC
CCGCTGGAGA CGCCCGCAGG GGAACGGTTT TCTCTGTTCA ACCTGGCCAT GGGCGACCTG
ACAAACGCCG GCACGCCCCA GGTGATCGCC TATGACGACA ACGATCACCT GCGGATCTAT
GACAAAGAGG GGCAAATGGT CTGGAAAAGT GAAAACCCCT TTGGCGGCAG CGAAACCTAT
ATTACCACCA AAGAGGACAG CGATAACGAG ATCGGCCAGC GGTTCTACTT GGCCCAGCGG
ATCTGGGTGG GGGACATCGA CGGCGACGGC CGCACCGAGG TGATCACCGT GGCCAACAAT
GCCGTGTCCG GCCGATTGTT TGACCGGTTC CGTCACTACA GCGGGGCTCA GTTTGTCTGC
CTGGGATGGG ACGGCCTGGG CCTGGCTGAA AAGTGGCACA CCCGCCAGGT CTCCGGTTAT
GCCAGCGATT TTTCTTTGGC CGATTTTGAT AACGACGGCA AGCCGGAGCT GGTGTCTGCC
ATTGTCTCAT CCCGGGGCGC GGTGGTGACC AAACCCAGAT CATCGGTGAT CAGCTATGAC
CTGGAAGGGG CACAATAG
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| Protein sequence | MMRIFVCRIL FLAVFLLPGL SGGAAHARVA SLAITPFAIN AETDLSYLSR GAAEMLASRI
AAQSDVSVMD MALVADAAAR APQPLTRAGA VALGRQLNAD YVLFGSITVL GGPVSMDVNV
IPVAEGSGPP AAFYKQADSI AGVIPAVGAL AGEIRTTVFA AAPLGDSTVT TPSAAAPTET
GPPAPVPVAV PAGAPAGAVM AARAPAPAGE RTTDAGSSAF VVSGQPGQEQ DFWKSQDFEA
EIRGLALADV SGDGKTETVL LTDRLLTVRR LEQGRFYKLA EHRLAGYENP LAVDAVDTDN
NGQAEIFVTC INKTTGALAS FVLELSDRTL TTVAQKQAWY FRSMGDGAIY GQKKGLGMAD
IFLPGIFRLA RQGGQYTAQA PLETPAGERF SLFNLAMGDL TNAGTPQVIA YDDNDHLRIY
DKEGQMVWKS ENPFGGSETY ITTKEDSDNE IGQRFYLAQR IWVGDIDGDG RTEVITVANN
AVSGRLFDRF RHYSGAQFVC LGWDGLGLAE KWHTRQVSGY ASDFSLADFD NDGKPELVSA
IVSSRGAVVT KPRSSVISYD LEGAQ
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