Gene Dole_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_0012 
Symbol 
ID5692826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp11993 
End bp13690 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content64% 
IMG OID641262588 
Productintegrin-like repeat-containing protein 
Protein accessionYP_001527899 
Protein GI158520029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.57714e-07 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCGTA TTTTCGTTTG CAGAATTCTT TTTTTGGCCG TGTTCCTGCT GCCGGGCCTG 
TCTGGCGGCG CGGCCCATGC CCGGGTGGCG AGCCTTGCCA TCACCCCCTT TGCCATCAAC
GCCGAAACTG ATCTTTCCTA CCTTTCCAGG GGCGCGGCCG AGATGCTGGC CTCGCGCATC
GCGGCCCAGT CCGACGTGTC GGTGATGGAC ATGGCCCTGG TGGCCGATGC CGCGGCACGT
GCCCCGCAGC CCCTGACCCG CGCCGGCGCC GTGGCCCTGG GACGACAGCT GAATGCCGAC
TACGTGCTGT TCGGCAGCAT TACCGTGCTG GGCGGGCCTG TGAGCATGGA TGTGAACGTG
ATTCCCGTGG CCGAGGGCAG TGGTCCGCCG GCCGCCTTTT ACAAGCAGGC CGATTCCATT
GCCGGCGTGA TTCCGGCGGT GGGGGCCCTG GCCGGGGAGA TTCGCACAAC CGTGTTTGCC
GCCGCGCCTT TGGGTGACAG CACCGTGACG ACCCCGTCCG CGGCCGCACC CACGGAAACC
GGGCCACCGG CCCCGGTCCC GGTGGCCGTG CCGGCAGGCG CCCCGGCCGG GGCCGTGATG
GCCGCTCGGG CACCGGCGCC TGCCGGAGAG AGAACAACGG ATGCCGGGTC ATCCGCCTTT
GTGGTGTCAG GCCAGCCCGG CCAGGAACAG GACTTCTGGA AGAGCCAGGA TTTTGAGGCC
GAGATTCGCG GCCTGGCCCT GGCCGATGTC TCCGGTGACG GCAAGACTGA AACCGTGCTG
CTTACCGACA GGCTGCTCAC GGTGCGGCGC CTGGAGCAGG GCCGGTTTTA CAAGCTGGCC
GAGCACCGCC TGGCCGGCTA CGAAAACCCC CTGGCCGTGG ATGCCGTGGA TACGGACAAC
AACGGCCAGG CCGAGATCTT TGTCACCTGC ATCAACAAGA CCACCGGGGC ACTGGCCTCC
TTTGTGCTGG AACTTTCCGA CCGGACCCTG ACAACGGTGG CCCAAAAACA GGCCTGGTAT
TTCCGCTCCA TGGGGGATGG CGCCATTTAC GGTCAGAAAA AAGGACTTGG CATGGCCGAT
ATTTTTCTGC CCGGCATTTT TCGCCTGGCC CGGCAGGGCG GCCAATACAC GGCCCAGGCC
CCGCTGGAGA CGCCCGCAGG GGAACGGTTT TCTCTGTTCA ACCTGGCCAT GGGCGACCTG
ACAAACGCCG GCACGCCCCA GGTGATCGCC TATGACGACA ACGATCACCT GCGGATCTAT
GACAAAGAGG GGCAAATGGT CTGGAAAAGT GAAAACCCCT TTGGCGGCAG CGAAACCTAT
ATTACCACCA AAGAGGACAG CGATAACGAG ATCGGCCAGC GGTTCTACTT GGCCCAGCGG
ATCTGGGTGG GGGACATCGA CGGCGACGGC CGCACCGAGG TGATCACCGT GGCCAACAAT
GCCGTGTCCG GCCGATTGTT TGACCGGTTC CGTCACTACA GCGGGGCTCA GTTTGTCTGC
CTGGGATGGG ACGGCCTGGG CCTGGCTGAA AAGTGGCACA CCCGCCAGGT CTCCGGTTAT
GCCAGCGATT TTTCTTTGGC CGATTTTGAT AACGACGGCA AGCCGGAGCT GGTGTCTGCC
ATTGTCTCAT CCCGGGGCGC GGTGGTGACC AAACCCAGAT CATCGGTGAT CAGCTATGAC
CTGGAAGGGG CACAATAG
 
Protein sequence
MMRIFVCRIL FLAVFLLPGL SGGAAHARVA SLAITPFAIN AETDLSYLSR GAAEMLASRI 
AAQSDVSVMD MALVADAAAR APQPLTRAGA VALGRQLNAD YVLFGSITVL GGPVSMDVNV
IPVAEGSGPP AAFYKQADSI AGVIPAVGAL AGEIRTTVFA AAPLGDSTVT TPSAAAPTET
GPPAPVPVAV PAGAPAGAVM AARAPAPAGE RTTDAGSSAF VVSGQPGQEQ DFWKSQDFEA
EIRGLALADV SGDGKTETVL LTDRLLTVRR LEQGRFYKLA EHRLAGYENP LAVDAVDTDN
NGQAEIFVTC INKTTGALAS FVLELSDRTL TTVAQKQAWY FRSMGDGAIY GQKKGLGMAD
IFLPGIFRLA RQGGQYTAQA PLETPAGERF SLFNLAMGDL TNAGTPQVIA YDDNDHLRIY
DKEGQMVWKS ENPFGGSETY ITTKEDSDNE IGQRFYLAQR IWVGDIDGDG RTEVITVANN
AVSGRLFDRF RHYSGAQFVC LGWDGLGLAE KWHTRQVSGY ASDFSLADFD NDGKPELVSA
IVSSRGAVVT KPRSSVISYD LEGAQ