Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_0002 |
Symbol | |
ID | 5692816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1624 |
End bp | 3012 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641262578 |
Product | FAD linked oxidase domain-containing protein |
Protein accession | YP_001527889 |
Protein GI | 158520019 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCCCC TGACGAAAAA GACAATCGAA GAGATTCAGG GCATCGTGGG AAGCGACCAC TGCACCACGG CCCCTGAAGA CCGGGTCTGC TACGCCTACG ACGCATCCGC CGCCGACTGC CTGCCCGATG CCGTGGTGTT TCCCGCGGAC CGGGACCAGG TGGCCCGGGT GCTGGCCCTG GCGCACAGGG ATGGGTTTTG TGTCACTCCC CGGGGATCGG GATCAGGCAT GACCGGCGGG TCGGTACCGG TGGCCGGGGG CGTGGTCATG GTGTTAAACC GGCTCAACCG GATTCTGGAG ATCGACACGG ACAACCTGGT GGCTCGCGTT GAGCCGGGGG TGATCACCGG CGACTTTCAC AAGGCCGTGG AGGCACTGGG CCTTTTTTAT CCGCCCGATC CCTCCAGCGC CGCCTTTTCC ACCCTGGGCG GCAACGTGGC CGAGTGCGCG GGCGGCCCCC GGGCCGTCAA ATATGGAGTG ACACGGGATT ATGTTCTGGG GTTGTCAGCA GTGCTGCCCA ACGGCGATAT TATTACCACC GGCGTTCGCA CGGCCAAGGG GGTGGCCGGC TACGACCTGA CCCGGCTGAT TGCCGGTTCC GAAGGCACCC TGGCCGTGAT TACTGAAATG ACCCTGCGGC TGTTGCCCCT GCCCGAGGCA GTGGGCACCA TGACGGCCCT GTTTGACGAC ATCCGGCAGG CGGCGCGCAC CGTGTCTGAA ATTATTCGGC AACGGATCGT GCCGCGCACC CTGGAGTTTA TAGACAACGC CTCCCTTGGC TGCGTGGAAA AAAGCCTGAA TCTGGGGTTG CCGATAACGG CGGCGGCCAT GCTGCTGATC GAGGTGGACG GCGCGCCTTT GGCCAATACC GCGGCCCTTG AAAAAATTGC CGCCATCTGC ACCAGTCAGG GCGCCACCCA GGTGACGGTG GCCGACACGA AACAGGCCGC CGAAGACCTG TGGCGGGCCC GCAAGGCCAT CTCCCCCGCC CTTTTCAACC TGGCCCCGGA CAAGATCAAT GAAGATATCG TGGTGCCCCG CAGCCGGATT CCCGACATGG TGGCGGCCCT GGAGGCCCTG AGCCGGCAAA CCGGCCTGAC CATCGCCTGC TTCGGCCATG CCGGCGACGG CAACATTCAC GTGAATATCA TGGCCGACAA AAAAGATCCG GTGCAGGCGG AGAGGGCAAA AGAGGCGACA GACCGGCTTT TTGAAGAGAC ATTGCGCCTG GGCGGCACGA TTTCCGGCGA GCACGGCATC GGCATCACCA AGGCCCCCTA CCTGGGAAAA GAGGTGGGCG GAGCGGAGCT GATGCTGATG CGGCGAATAA AAAAGGTGTT TGACCCCAAC GGAATTTTAA ATCCCGGAAA AATCTTTCAC CTGATTTGA
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Protein sequence | MAPLTKKTIE EIQGIVGSDH CTTAPEDRVC YAYDASAADC LPDAVVFPAD RDQVARVLAL AHRDGFCVTP RGSGSGMTGG SVPVAGGVVM VLNRLNRILE IDTDNLVARV EPGVITGDFH KAVEALGLFY PPDPSSAAFS TLGGNVAECA GGPRAVKYGV TRDYVLGLSA VLPNGDIITT GVRTAKGVAG YDLTRLIAGS EGTLAVITEM TLRLLPLPEA VGTMTALFDD IRQAARTVSE IIRQRIVPRT LEFIDNASLG CVEKSLNLGL PITAAAMLLI EVDGAPLANT AALEKIAAIC TSQGATQVTV ADTKQAAEDL WRARKAISPA LFNLAPDKIN EDIVVPRSRI PDMVAALEAL SRQTGLTIAC FGHAGDGNIH VNIMADKKDP VQAERAKEAT DRLFEETLRL GGTISGEHGI GITKAPYLGK EVGGAELMLM RRIKKVFDPN GILNPGKIFH LI
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