Gene Dgeo_3086 details

Gene Information

• Locus tag: Dgeo_3086
• ID: 5687587
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Deinococcus geothermalis DSM 11300
• Kingdom: Bacteria
• Replicon accession: NC_009939
• Strand: -
• Start bp: 174678
• End bp: 175391
• Gene Length: 714 bp
• Protein Length: 237 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641262551
• Product: transposase
• Protein accession: YP_001527825
• Protein GI: 158421598
• COG category: [L] Replication, recombination and repair
• COG ID: [COG3316] Transposase and inactivated derivatives

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCTGCTG ACCCGAAGCC CTATCGCCAC CGTTTCCCCA AGAGCATCAT CCAACACGCC 
GTTTGGCTGT ATCACCGCTT CCCTCTCAGC TACCGAGATG TTGAAGAATT GCTGCTCCAA 
CGCGGAATTC AAGTCAGTCA CGAAACAATT CGTGACTGGT GCGATAAGTT CGGCCCCACC 
ATCACCAAGG AATTGAAGAA ACGGGAACCC CATCGGGGTT CCCATTGGCA CCTGGATGAA 
GTCTGCGTCA AGATCAAGGG CGTCAAGCAC TGGTTGTGGC GTGCCGTGGA CGAGCATGGC 
GCTGTGCTGG ATGTTCTTCT GCAAGAACAC CGCGACACTG AGGCGGCCAA GATGTTCTTC 
ACTATGTTGC TGAGCAACTA CGAGGCTCCA ACCACCATCC ACACCGACAA ACTGGGCAGT 
TACAGAGCAG CCATTCGTGA GATTCCTGAA CTTCATGGTG CGCTGCACCG TGAAGTGATT 
TCGACGGCCA GGTGCAACAA TTTGATTGAA CAGTCGCACC GACCGACACG AAATCAGGAA 
CGAAGCCAGA AAGGCTTCAA GGGCATAGAG AACACACAGA AATTCCTTGA TCTACACGCC 
AGAACCAGCA ATCTCCACCA GTTCACGCGA ACGACCGTGA CCGCCAAAAC GAGACGAAGC 
AACCAGAGAA CCGCTTTTCA AACCTGGAAC GAGGTTGCGC TGCTCGCAGC CTGA 

 

Protein sequence

MPADPKPYRH RFPKSIIQHA VWLYHRFPLS YRDVEELLLQ RGIQVSHETI RDWCDKFGPT 
ITKELKKREP HRGSHWHLDE VCVKIKGVKH WLWRAVDEHG AVLDVLLQEH RDTEAAKMFF 
TMLLSNYEAP TTIHTDKLGS YRAAIREIPE LHGALHREVI STARCNNLIE QSHRPTRNQE 
RSQKGFKGIE NTQKFLDLHA RTSNLHQFTR TTVTAKTRRS NQRTAFQTWN EVALLAA