| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_2916 |
|---|
| Symbol | |
|---|
| ID | 5687736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009939 |
|---|
| Strand | - |
|---|
| Start bp | 8435 |
|---|
| End bp | 9853 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641262383 |
|---|
| Product | Alpha-amylase |
|---|
| Protein accession | YP_001527657 |
|---|
| Protein GI | 158421430 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCCCG AGTGGGTTCA GGACGCCGTC TTCTACCAGA TCTTCCCCGA ACGCTTCCGC
AACGGCGACC CCACCAACGA CCCGCCCGGC ACCCTGCCCT GGGGCGGCAT ACCGGACCGC
GAGAACTTCT TCGGGGGGGA CCTGCGCGGG ATCATCGAGA AGCTCGACTA CTTGCAAGAC
CTGGGCGTGA CGGCGCTGTA CCTCAACCCG ATTTTCCAGG CGGGCACGAA CCACAAGTAC
GACACTCACG ATTACTTCCG CATCGACCCT GCGTTTGGAG ACGACGAGGT GTTCGACGAG
CTGGTGCGGG AACTGCATGG GCGGGGGATG CGCCTCATCC TCGACGGGGT ATTCAACCAC
TGTGGGGATG GCTTCGGGCC GTTTCAGGAC CTGCTGAAGA ATGGGGAGGC TTCACCCTAC
AAGGACTGGT TTACGCCATA CAGCTTCCCA CTCCAACAGG AACCCCACCC GAACTACGGC
ACCTGCGGGA ATTGCGCCTA CCTGCCGCGG CTGAACTGCC GCAACCCCGA GGTGGAGGCG
TTCGTTCACC GTGTCACCCT GCACTGGCTG GCGCGGGGCA TCGACGGCTG GCGGCTGGAC
GTGCCGTACG AGGTTCACAC CGACTTCTGG GTGCGGTTCC GGGAGGTGGT CAAGTCGCGC
TTCCCGGACG CCTACCTCGT GGCGGAGGAG TGGCGGGACC CGTATGCGCT GATTCAGGGG
GACTCTTTCG ACGGGGCGAT GCACTACCGG TTGCGGGACC TGGGCTTCGA CTTCATCCTG
AAAAATGCCC TGACTGCAGA TGCCTTTGCC CGTGCGTTGA CCACCTTGCG CGAACGGGTC
CCGGAAGAGA TCGAGCAGGG GATGCTTACC CTGCTGGGCA GCCACGACAC GGCCCGCTTG
CTGACCGAAT GCGGGGGAAA CATCGAGAGC GCCAAGCTGC TGTACACACT GCTGCTCACC
TACCCAGGCG CGCCGATGAT CTACTACGGA GACGAGAACG GCATGATGGG CGCGAATGAC
CCGGGCTGCC GCGCGCCGAT GGAGTGGGAC GAGACGAAGT GGAACCCCGG CCTGCGGGAC
CATGTGCGGC GTCTCATTGC CCTGCGCCGG GAGCATCCCG AGCTGCGACG GGGCACCTTC
CGCGTCCGGT ACGCCGAGGA CCGCCTGGTC ATGTTCGAGC GGTCGAGCGA GGAGGGGACA
ATACTCGTCG TTCTGAACAA CACCTACGTG CCTCGCCGGG TCACCATTCC CGCTTACTTG
CCCGAGGGCC TTACTCTTGT AAACATCCTT GACGGGACGC AGGTCAGGGT CGTGCGGAAC
TCTCTTCCAT TTGATTCCCT ACCAGCCCGG AGCAGCCTGA TTTTGAAAAC GGCACCTGTC
GGGGAACGAG TGGCCTCACG GGAAGCTGTG GCTGGATAA
|
|---|
| Protein sequence | MVPEWVQDAV FYQIFPERFR NGDPTNDPPG TLPWGGIPDR ENFFGGDLRG IIEKLDYLQD
LGVTALYLNP IFQAGTNHKY DTHDYFRIDP AFGDDEVFDE LVRELHGRGM RLILDGVFNH
CGDGFGPFQD LLKNGEASPY KDWFTPYSFP LQQEPHPNYG TCGNCAYLPR LNCRNPEVEA
FVHRVTLHWL ARGIDGWRLD VPYEVHTDFW VRFREVVKSR FPDAYLVAEE WRDPYALIQG
DSFDGAMHYR LRDLGFDFIL KNALTADAFA RALTTLRERV PEEIEQGMLT LLGSHDTARL
LTECGGNIES AKLLYTLLLT YPGAPMIYYG DENGMMGAND PGCRAPMEWD ETKWNPGLRD
HVRRLIALRR EHPELRRGTF RVRYAEDRLV MFERSSEEGT ILVVLNNTYV PRRVTIPAYL
PEGLTLVNIL DGTQVRVVRN SLPFDSLPAR SSLILKTAPV GERVASREAV AG
|
|---|
| |