Gene Franean1_7332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_7332 
Symbol 
ID5675633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp8968327 
End bp8969256 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content73% 
IMG OID641246169 
ProductparB-like partition protein 
Protein accessionYP_001511557 
Protein GI158319049 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.443999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC GGCGTGGTGG TCTGGGCCGT GGTCTCGGCG CGCTCATTCC GGCGGCCGCC 
GAGCCGCAGG ACGGCTACCA GAGCAACGGC CTGGACCATG CTCCGGCAGC GGCTCCTGTC
CCGGTCGCGG GCGCGGTCTT CCGGGAGATC CCGGTGGACT CGGTGACCCC GAATCCGCGC
CAGCCACGCA CCCACTTCGA CGAGGACGCC ATCGCGGAGC TCGCCGCGAG CCTGCGCGAG
GTGGGGCTAC TGCAGCCGAT CGTCGTCCGG GAGCTCCTGC CCGGCCGCTA CGAGCTGGTC
ATGGGCGAGC GGCGCTGGCG CGCGTCGAAG CTCGCCGGGC TGGAGCGGGT GCCCGCCATC
GTCCGGGACA CCGCGGACGA CGCCATGCTG CGCGACGCCC TGCTGGAGAA CCTGCACCGC
CAGCAGCTCA ACCCGCTCGA GGAGGCCGCG GCCTACGAGC AGCTGCTGCG TGACTTCGGG
GCGACCCACG AGGAGCTGGC CGGGCGCCTG GGCCGGTCGC GCTCGCACGT CACGAACACG
ATTCGCCTGC TCGGGCTGCC GCCGGCAGTG CAGCGTCGGG TGGCGGCCGG AGTGCTGTCC
GCCGGGCACG CCCGCGCACT GCTCTCACTG GAGGACCCCG ACGCCCAGGA CAGGCTGGCG
ACGCGCATCG TCGCCGAGGG CCTGTCCGTG CGGGCGGTGG AGGAGATCGT GGCCCTCGGG
GAGGAAGGGC CCCGCAAGCG GGCTCCACGT GGGCCGCGGA CGACCGCGCC CGCGCTGACC
CGGATCGCCG ACCGTCTGTC GGACCGGTTG GAGACCCGGG TCAAGGTGGA CATGGGCCGC
AGCAAGGGCC GCATCACCGT GGAGTTCGCG ACGATCGAGG ACCTGGAGCG GATCGTCGAG
GTGATGTCCC CGAACTCGAA GGTCTCCTGA
 
Protein sequence
MTARRGGLGR GLGALIPAAA EPQDGYQSNG LDHAPAAAPV PVAGAVFREI PVDSVTPNPR 
QPRTHFDEDA IAELAASLRE VGLLQPIVVR ELLPGRYELV MGERRWRASK LAGLERVPAI
VRDTADDAML RDALLENLHR QQLNPLEEAA AYEQLLRDFG ATHEELAGRL GRSRSHVTNT
IRLLGLPPAV QRRVAAGVLS AGHARALLSL EDPDAQDRLA TRIVAEGLSV RAVEEIVALG
EEGPRKRAPR GPRTTAPALT RIADRLSDRL ETRVKVDMGR SKGRITVEFA TIEDLERIVE
VMSPNSKVS